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MZ516527.1__QXN68756.1__X__00034
Bact-VirMZ516527.1__QXN68756.1__X__00034
Identity
- Accession:
- MZ516527 ↗
- Kingdom:
- phage
Quality
72.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-27_109-176
D2
high
residues 182-283
Domain cluster:
rep: MW677529.1__QXN72695.1__RCZAHN_86__00086__D113-235
D3
medium
residues 63-100
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.95 | 80.0 | 4.50e-01 | 100.0% | 10.1% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.93 | 78.0 | 7.00e-01 | 100.0% | 68.6% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.92 | 71.0 | 4.31e-01 | 100.0% | 14.7% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.91 | 75.0 | 5.13e-01 | 100.0% | 28.2% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.91 | 69.0 | 6.44e-01 | 100.0% | 66.7% |
| 3ppuB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.90 | 68.0 | 4.79e-01 | 100.0% | 28.3% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.89 | 81.0 | 5.42e-01 | 100.0% | 29.0% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 68.0 | 5.46e-01 | 100.0% | 43.8% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.89 | 72.0 | 5.52e-01 | 100.0% | 40.7% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.88 | 78.0 | 5.45e-01 | 100.0% | 33.3% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.87 | 77.0 | 5.97e-01 | 100.0% | 47.5% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.84 | 64.0 | 4.71e-01 | 100.0% | 32.7% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 72.0 | 4.52e-01 | 100.0% | 42.1% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.81 | 70.0 | 4.97e-01 | 100.0% | 34.2% |
| 3tuiA00 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.80 | 68.0 | 4.21e-01 | 100.0% | 87.5% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.79 | 60.0 | 3.76e-01 | 100.0% | 15.3% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 60.0 | 5.54e-01 | 92.1% | 64.7% |
| 4htpB00 | 1.10.3260.10 | Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain | 0.76 | 60.0 | 3.75e-01 | 100.0% | 15.8% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.74 | 59.0 | 3.99e-01 | 100.0% | 25.2% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.74 | 48.0 | 4.18e-01 | 78.9% | 43.9% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 61.0 | 5.05e-01 | 100.0% | 54.2% |
| 2qbyB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 50.0 | 3.72e-01 | 81.6% | 28.4% |
| 3qxyA02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.69 | 58.0 | 3.85e-01 | 100.0% | 22.8% |
| 1vt0k00 | 1.10.3230.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) | 0.68 | 54.0 | 3.81e-01 | 100.0% | 44.1% |
| 1hr7C02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.68 | 57.0 | 3.45e-01 | 92.1% | 42.7% |
| 3ih6E00 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.68 | 54.0 | 3.47e-01 | 89.5% | 69.8% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.68 | 56.0 | 3.65e-01 | 100.0% | 20.0% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 52.0 | 4.67e-01 | 100.0% | 84.7% |
| 3mc1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 52.0 | 4.50e-01 | 100.0% | 88.1% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 3.73e-01 | 92.1% | 93.3% |
| 2vx2G02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.64 | 52.0 | 4.62e-01 | 100.0% | 63.6% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.62 | 47.0 | 4.36e-01 | 100.0% | 62.7% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 3.79e-01 | 97.4% | 70.5% |
| 1vryA00 | 6.10.250.2810 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 48.0 | 4.33e-01 | 100.0% | 68.9% |
| 1uxdA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 45.0 | 4.05e-01 | 89.5% | 78.0% |
| 1zl8B00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.59 | 45.0 | 4.22e-01 | 97.4% | 81.5% |
| 1axdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 43.0 | 3.23e-01 | 100.0% | 29.3% |
| 1xs9D00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 45.0 | 3.66e-01 | 92.1% | 74.1% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 41.0 | 2.89e-01 | 97.4% | 24.4% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 40.0 | 3.19e-01 | 92.1% | 76.8% |
| 1iufA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 40.0 | 3.44e-01 | 94.7% | 76.6% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 38.0 | 3.22e-01 | 76.3% | 90.9% |
| 3aleA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 37.0 | 2.76e-01 | 92.1% | 32.2% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3361840 | 3796.1.1.0 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain | 0.90 | 68.0 | 6.69e-01 | 100.0% | 77.5% |
| 4377859 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.90 | 82.0 | 5.24e-01 | 100.0% | 24.1% |
| 2141223 | 5055.1.1.1 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel › CaMBD | 0.88 | 77.0 | 5.70e-01 | 100.0% | 40.0% |
| 981174 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.87 | 77.0 | 5.26e-01 | 100.0% | 29.9% |
| 5002748 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.86 | 73.0 | 5.69e-01 | 100.0% | 46.7% |
| 5022995 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.86 | 64.0 | 4.02e-01 | 100.0% | 16.8% |
| 4144952 | 2485.1.1.39 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_2 | 0.85 | 75.0 | 4.56e-01 | 100.0% | 17.3% |
| 3266824 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.85 | 74.0 | 4.48e-01 | 100.0% | 16.6% |
| 3942287 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.85 | 74.0 | 5.14e-01 | 100.0% | 31.7% |
| 3639947 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.85 | 66.0 | 4.14e-01 | 100.0% | 17.8% |
| 5035232 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.85 | 70.0 | 5.69e-01 | 100.0% | 50.0% |
| 3969456 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.84 | 72.0 | 4.48e-01 | 100.0% | 18.2% |
| 5050359 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.83 | 69.0 | 5.57e-01 | 100.0% | 50.0% |
| 3168386 | 109.4.1.46 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N | 0.82 | 62.0 | 3.68e-01 | 100.0% | 11.9% |
| 3212951 | 109.4.1.1251 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_XPO7 | 0.79 | 63.0 | 3.34e-01 | 100.0% | 3.2% |
| 3739696 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.77 | 67.0 | 4.55e-01 | 100.0% | 28.3% |
| 4322913 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.77 | 59.0 | 5.87e-01 | 86.8% | 100.0% |
| 3838721 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 63.0 | 4.57e-01 | 100.0% | 33.0% |
| 3279069 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.75 | 61.0 | 5.44e-01 | 100.0% | 63.6% |
| 3820265 | 109.4.1.46 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N | 0.73 | 62.0 | 3.26e-01 | 100.0% | 3.4% |
| 3597463 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.73 | 63.0 | 4.99e-01 | 100.0% | 48.8% |
| 3517172 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.71 | 61.0 | 3.58e-01 | 100.0% | 11.5% |
| 3337711 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.70 | 59.0 | 5.68e-01 | 100.0% | 81.4% |
| 5050846 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.66 | 57.0 | 3.62e-01 | 100.0% | 49.0% |
| 3930038 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 57.0 | 4.34e-01 | 100.0% | 82.2% |
| 5052064 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.66 | 50.0 | 3.14e-01 | 100.0% | 13.7% |
| 4423180 | 3736.1.1.2 ↗ | alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4_HD | 0.65 | 56.0 | 4.14e-01 | 100.0% | 37.1% |
| 3715735 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.65 | 52.0 | 4.03e-01 | 89.5% | 41.2% |
| 4994339 | 601.5.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Colicin D immunity protein › Colicin D immunity protein | 0.63 | 47.0 | 4.16e-01 | 100.0% | 52.9% |
| 3979831 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 50.0 | 4.21e-01 | 97.4% | 52.3% |
| 5001463 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.61 | 50.0 | 2.95e-01 | 92.1% | 21.4% |
| 3736537 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.54 | 42.0 | 3.08e-01 | 100.0% | 30.0% |