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MZ520832.1__QYC52576.1__X__00146

Bact-Vir

MZ520832.1__QYC52576.1__X__00146

Identity

Accession:
MZ520832 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_SSBI34

TaxID: 2861009

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-83
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24144.2 best Phage_tudor 64.2 1.20e-17 100.0% 80.9%
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.26e-01 89.9% 70.2%
4ifdI02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 52.0 4.07e-01 81.2% 78.5%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 44.0 4.72e-01 79.7% 76.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 4.85e-01 97.1% 71.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 44.0 4.99e-01 79.7% 90.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 44.0 4.84e-01 79.7% 83.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 43.0 4.95e-01 79.7% 93.8%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.67 51.0 3.69e-01 82.6% 83.6%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 43.0 4.93e-01 78.3% 91.8%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.65 57.0 4.26e-01 100.0% 88.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 42.0 4.58e-01 73.9% 79.7%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 42.0 4.77e-01 79.7% 92.0%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.64 43.0 4.03e-01 71.0% 68.2%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.62e-01 82.6% 79.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.25e-01 85.5% 69.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 46.0 4.73e-01 95.7% 83.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.62 43.0 4.72e-01 98.6% 94.4%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 4.27e-01 92.8% 68.1%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.50e-01 94.2% 78.8%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 43.0 4.53e-01 89.9% 85.0%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 43.0 4.18e-01 79.7% 67.1%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 46.0 4.91e-01 97.1% 98.3%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.55e-01 91.3% 81.8%
6ya6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 41.0 3.67e-01 72.5% 92.9%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.59 44.0 3.70e-01 81.2% 82.0%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.59 41.0 3.34e-01 72.5% 85.2%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 39.0 4.19e-01 79.7% 81.4%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 45.0 4.80e-01 88.4% 98.3%
1wdiA02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.58 44.0 4.33e-01 81.2% 98.6%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.57 46.0 4.02e-01 100.0% 57.8%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.00e-01 91.3% 67.4%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 34.0 3.84e-01 76.8% 87.8%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.08e-01 100.0% 66.0%
2qqpA03 2.60.40.4260 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 40.0 3.30e-01 81.2% 89.8%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 4.27e-01 100.0% 98.3%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.60e-01 89.9% 90.8%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 38.0 3.07e-01 79.7% 90.6%
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.52 43.0 4.24e-01 97.1% 98.6%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 46.0 4.18e-01 98.6% 83.3%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 36.0 3.44e-01 82.6% 63.9%
2v4dE01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.51 32.0 3.10e-01 78.3% 53.6%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 52.0 5.68e-01 97.1% 90.9%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 54.0 5.56e-01 94.2% 81.5%
4937587 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.72 56.0 4.25e-01 85.5% 39.4%
3037102 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 46.0 4.86e-01 88.4% 74.2%
5018860 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.71 57.0 4.39e-01 87.0% 47.3%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 48.0 5.23e-01 89.9% 89.1%
3597513 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 45.0 4.99e-01 71.0% 83.6%
3941004 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.15e-01 98.6% 71.2%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 48.0 5.27e-01 98.6% 90.9%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.69 45.0 4.74e-01 89.9% 76.7%
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 44.0 4.85e-01 78.3% 81.8%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 44.0 4.15e-01 79.7% 54.1%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 46.0 5.11e-01 79.7% 89.1%
3420348 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.67 44.0 4.82e-01 89.9% 83.6%
3507003 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.44e-01 91.3% 92.0%
3407089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 50.0 4.77e-01 100.0% 68.8%
3484822 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.67 50.0 4.78e-01 92.8% 68.8%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.65 53.0 5.12e-01 89.9% 78.8%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.80e-01 88.4% 83.3%
4268386 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.84e-01 92.8% 80.0%
3699652 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.22e-01 100.0% 90.8%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.85e-01 81.2% 86.7%
3310575 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.64 58.0 5.02e-01 100.0% 95.2%
3941391 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 41.0 4.37e-01 73.9% 75.0%
2727964 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.64 44.0 4.70e-01 79.7% 83.1%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.73e-01 94.2% 80.0%
4929472 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.49e-01 78.3% 73.8%
3907619 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 46.0 4.36e-01 100.0% 62.4%
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.64 43.0 4.49e-01 92.8% 75.4%
4019085 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.63 45.0 4.15e-01 75.4% 96.7%
3459099 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.63 56.0 4.88e-01 100.0% 89.5%
3455944 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 51.0 3.99e-01 94.2% 91.9%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.81e-01 97.1% 86.2%
1263519 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.62 44.0 4.69e-01 88.4% 83.9%
3486329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 43.0 4.48e-01 88.4% 78.5%
3721314 219.1.1.93 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.61 53.0 4.45e-01 95.7% 86.1%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.75e-01 79.7% 89.1%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.61 43.0 4.43e-01 89.9% 78.5%
4932493 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.79e-01 100.0% 86.2%
3363448 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.61 51.0 4.76e-01 94.2% 74.1%
171891 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.61 42.0 4.54e-01 88.4% 90.9%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.78e-01 100.0% 77.5%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 51.0 4.60e-01 94.2% 80.0%
3358753 4.1.1.381 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.60 44.0 3.35e-01 92.8% 32.7%
2841854 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.60 42.0 3.48e-01 75.4% 97.0%
4613812 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.83e-01 100.0% 77.6%
3251414 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.56e-01 100.0% 66.4%
4340758 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.48e-01 79.7% 85.7%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.59 45.0 4.31e-01 87.0% 70.0%
5043037 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.59 42.0 3.83e-01 78.3% 88.0%
3816455 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 48.0 3.96e-01 89.9% 59.2%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 49.0 4.65e-01 94.2% 80.0%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 49.0 4.74e-01 94.2% 95.0%
4228570 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.83e-01 94.2% 82.5%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 43.0 4.44e-01 78.3% 92.3%
3996279 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.58 49.0 4.71e-01 100.0% 81.2%
4220126 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 50.0 4.66e-01 98.6% 76.5%
3494683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.24e-01 91.3% 78.6%
3703933 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.58 42.0 4.30e-01 78.3% 81.5%
4246480 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.58 43.0 3.92e-01 81.2% 88.4%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.11e-01 94.2% 64.3%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 46.0 3.68e-01 95.7% 44.4%
3241614 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 47.0 3.82e-01 95.7% 92.4%
4555816 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.48e-01 97.1% 74.1%
3947980 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.57 43.0 3.84e-01 81.2% 84.0%
4105189 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.57 44.0 3.93e-01 82.6% 88.4%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.56 48.0 4.57e-01 94.2% 92.5%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 3.34e-01 92.8% 40.5%
3377696 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.56 50.0 3.60e-01 100.0% 71.5%
4606231 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.55 41.0 3.77e-01 81.2% 90.3%
4033182 4.1.1.61 ↗ beta barrels › SH3 › SH3 › SH3 › KapB 0.55 49.0 4.07e-01 100.0% 65.0%
3996278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 44.0 3.72e-01 89.9% 57.5%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.07e-01 91.3% 91.6%
3950458 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.54 46.0 3.53e-01 100.0% 71.1%
5021635 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.54 41.0 3.26e-01 92.8% 38.3%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 46.0 4.42e-01 98.6% 82.5%
3625264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.07e-01 100.0% 75.8%
3520092 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.52 36.0 3.49e-01 73.9% 98.8%
3287567 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.52 39.0 3.57e-01 81.2% 63.3%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 45.0 3.20e-01 100.0% 32.0%
3413401 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 2.71e-01 100.0% 75.8%
3922426 4.1.1.363 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.51 45.0 3.76e-01 98.6% 89.2%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 4.07e-01 94.2% 83.5%
3354387 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.51 45.0 4.19e-01 98.6% 85.9%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 45.0 4.20e-01 98.6% 89.4%