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MZ520832.1__QYC52656.1__X__00226

Bact-Vir

MZ520832.1__QYC52656.1__X__00226

Identity

Accession:
MZ520832 ↗
Kingdom:
phage

Quality

96.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-83
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.76 47.0 4.66e-01 74.4% 60.0%
1k8kD01 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.72 55.0 4.47e-01 81.7% 74.2%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.69 42.0 3.52e-01 81.7% 36.3%
1k8kF00 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.69 53.0 4.19e-01 82.9% 56.3%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.68 38.0 3.80e-01 97.6% 51.1%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.66 51.0 4.31e-01 81.7% 70.8%
7vt9A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 35.0 3.72e-01 96.3% 60.3%
3djcB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 50.0 4.94e-01 89.0% 80.7%
6fmeA03 2.20.220.10 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases 0.62 41.0 4.75e-01 80.5% 90.3%
3nuwA01 3.30.420.300 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain 0.62 49.0 4.81e-01 91.5% 78.9%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.62 55.0 4.66e-01 100.0% 78.7%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 54.0 4.26e-01 100.0% 61.4%
3mdqA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.60 52.0 3.94e-01 93.9% 80.4%
5w0kA01 3.90.380.20 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II 0.60 52.0 3.52e-01 100.0% 44.3%
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.59 42.0 4.44e-01 89.0% 83.8%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.58 43.0 3.80e-01 95.1% 52.8%
1u6zA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.57 49.0 3.85e-01 96.3% 83.8%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.57 37.0 3.95e-01 85.4% 77.5%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.56 44.0 3.93e-01 86.6% 82.8%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.56 50.0 3.91e-01 100.0% 66.9%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 48.0 4.32e-01 100.0% 95.8%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.98e-01 90.2% 96.1%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.90e-01 90.2% 68.2%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.55 45.0 4.11e-01 98.8% 67.5%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 49.0 3.13e-01 98.8% 37.2%
4h0aA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.55 49.0 3.34e-01 98.8% 57.5%
3rbyA02 2.40.128.310 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain 0.54 48.0 4.61e-01 100.0% 93.7%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 44.0 3.23e-01 93.9% 96.0%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 44.0 3.87e-01 91.5% 96.0%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 43.0 3.78e-01 90.2% 96.9%
1p90A00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.52 40.0 3.57e-01 84.1% 71.5%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 38.0 3.63e-01 78.0% 85.7%
2mhgA00 2.20.130.30 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 0.52 38.0 3.93e-01 81.7% 85.3%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.51 40.0 2.87e-01 82.9% 56.2%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 43.0 3.83e-01 93.9% 89.9%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 3.13e-01 82.9% 76.1%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
165398 7515.1.1.2 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.76 47.0 2.85e-01 74.4% 11.0%
3432311 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.75 58.0 4.63e-01 82.9% 60.6%
3219425 5.1.3.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.71 56.0 4.80e-01 100.0% 54.4%
3648515 241.6.1.2 a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › ARPC4 0.70 55.0 4.27e-01 82.9% 67.1%
4082107 7089.1.1.3 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD 0.70 45.0 4.80e-01 82.9% 75.7%
4390303 5.1.3.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.69 55.0 3.27e-01 100.0% 11.8%
3597339 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.69 51.0 3.48e-01 100.0% 24.2%
3707133 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.68 52.0 3.81e-01 81.7% 69.5%
3596915 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.66 52.0 3.11e-01 84.1% 28.2%
5007420 2484.1.1.333 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 0.65 52.0 4.11e-01 86.6% 64.2%
3624211 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.64 55.0 4.33e-01 92.7% 90.3%
3264756 4075.1.1.2 a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.64 57.0 5.37e-01 100.0% 95.0%
3228340 4075.1.1.2 a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.64 57.0 5.36e-01 100.0% 97.0%
5060431 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.64 47.0 3.02e-01 90.2% 16.8%
4826520 12.1.1.53 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C_2 0.64 35.0 3.71e-01 97.6% 59.5%
4972588 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.63 44.0 2.94e-01 85.4% 18.5%
3743052 5.1.4.78 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.63 49.0 2.99e-01 100.0% 14.9%
3603731 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.63 54.0 4.62e-01 100.0% 93.6%
2458379 12.1.1.13 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Suc_Porlyase_C 0.62 41.0 4.47e-01 80.5% 78.9%
3945440 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.62 47.0 4.35e-01 89.0% 62.9%
136506 4075.1.1.2 a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.62 54.0 5.13e-01 100.0% 97.0%
4466450 63.1.1.0 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain 0.62 55.0 4.59e-01 98.8% 80.7%
3512065 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 41.0 4.61e-01 75.6% 86.2%
3990496 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.61 46.0 4.92e-01 84.1% 91.4%
3930399 4075.1.1.0 a+b complex topology › RGC domain › RGC domain › RGC domain 0.61 53.0 5.00e-01 100.0% 96.0%
1034013 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.59 43.0 4.47e-01 90.2% 80.8%
4944430 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.59 49.0 5.03e-01 95.1% 97.5%
4015961 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 55.0 3.33e-01 100.0% 21.3%
3247651 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.92e-01 100.0% 94.0%
3988075 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 48.0 3.17e-01 90.2% 27.1%
4023269 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 46.0 4.23e-01 86.6% 67.3%
5039391 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 53.0 3.29e-01 100.0% 19.8%
3268322 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.57 42.0 2.74e-01 82.9% 17.8%
3480829 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.57 44.0 3.81e-01 81.7% 84.0%
3738183 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.57 44.0 3.88e-01 84.1% 55.2%
3468426 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 45.0 3.00e-01 86.6% 39.7%
5016773 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.56 46.0 3.78e-01 89.0% 48.7%
3387142 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 46.0 3.55e-01 91.5% 41.6%
3933565 5.1.4.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N 0.56 44.0 2.86e-01 85.4% 24.7%
4939725 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.56 47.0 3.38e-01 100.0% 79.3%
3270960 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.56 44.0 3.85e-01 84.1% 84.2%
4956163 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.55 49.0 3.84e-01 100.0% 71.1%
4243201 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 48.0 3.68e-01 95.1% 55.7%
3452139 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.55 38.0 2.61e-01 73.2% 68.2%
3940112 2484.5.1.0 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.55 43.0 3.77e-01 82.9% 88.3%
3382554 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.55 42.0 3.87e-01 89.0% 62.9%
3605319 5.1.4.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 0.55 48.0 3.11e-01 100.0% 33.3%
3700249 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 2.90e-01 100.0% 27.5%
3667081 12.1.1.36 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GHD 0.54 39.0 4.08e-01 79.3% 81.3%
3380536 4252.1.1.7 beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.54 41.0 3.31e-01 79.3% 52.0%
3925827 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 3.52e-01 100.0% 89.3%
4122018 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.54 41.0 3.87e-01 82.9% 70.0%
3709736 5.1.4.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 0.54 50.0 3.15e-01 100.0% 23.9%
3666734 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.53 45.0 3.89e-01 93.9% 73.8%
3501432 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 42.0 3.79e-01 85.4% 69.1%
3168452 331.10.2.3 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 0.52 40.0 3.80e-01 86.6% 73.3%
4672450 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.52 48.0 3.50e-01 100.0% 49.3%
3964752 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.52 40.0 3.28e-01 84.1% 78.5%
3225530 5.1.4.56 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 0.51 46.0 2.91e-01 100.0% 26.7%
3250807 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 44.0 3.40e-01 100.0% 76.0%
3251788 9.1.1.37 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 0.50 42.0 3.40e-01 93.9% 61.2%