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MZ520832.1__QYC52659.1__X__00229
Bact-VirMZ520832.1__QYC52659.1__X__00229
Identity
- Accession:
- MZ520832 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-100
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aehA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 47.0 | 4.52e-01 | 100.0% | 71.2% |
| 6sshA01 | 3.40.50.11210 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Rap/Ran-GAP | 0.58 | 37.0 | 3.01e-01 | 72.4% | 34.6% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 41.0 | 4.47e-01 | 100.0% | 92.8% |
| 1r9fA01 | 3.30.390.180 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 | 0.55 | 41.0 | 4.04e-01 | 79.6% | 98.2% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.55 | 32.0 | 3.09e-01 | 77.6% | 48.2% |
| 3mcpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 35.0 | 3.38e-01 | 76.5% | 57.1% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.54 | 31.0 | 3.08e-01 | 70.4% | 52.3% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 38.0 | 3.57e-01 | 73.5% | 84.5% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.53 | 33.0 | 3.61e-01 | 74.5% | 77.2% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.53 | 32.0 | 3.30e-01 | 76.5% | 62.1% |
| 3tqmA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.52 | 31.0 | 3.20e-01 | 83.7% | 62.2% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 31.0 | 3.47e-01 | 90.8% | 80.3% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 37.0 | 3.11e-01 | 76.5% | 64.4% |
| 2kcdA00 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.51 | 37.0 | 3.50e-01 | 80.6% | 62.5% |
| 2zgiA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.51 | 34.0 | 3.41e-01 | 75.5% | 66.7% |
| 1f06A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 35.0 | 3.21e-01 | 72.4% | 91.3% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 42.0 | 3.08e-01 | 91.8% | 86.7% |
| 3g3tA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.50 | 39.0 | 2.90e-01 | 85.7% | 71.2% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3439202 | 220.1.1.30 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH | 0.66 | 44.0 | 4.73e-01 | 100.0% | 80.0% |
| 3718300 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 41.0 | 4.54e-01 | 94.9% | 82.7% |
| 3846404 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.62 | 47.0 | 4.07e-01 | 100.0% | 52.7% |
| 3492666 | 220.1.1.151 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MRCK | 0.61 | 42.0 | 4.74e-01 | 94.9% | 93.3% |
| 4941253 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.59 | 47.0 | 4.75e-01 | 100.0% | 84.0% |
| 3290300 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.58 | 44.0 | 4.67e-01 | 98.0% | 91.8% |
| 4213613 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 31.0 | 3.07e-01 | 70.4% | 45.5% |
| 4965393 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.57 | 37.0 | 3.88e-01 | 95.9% | 72.2% |
| 3579992 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 44.0 | 3.75e-01 | 100.0% | 51.6% |
| 5024241 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.57 | 36.0 | 3.70e-01 | 83.7% | 66.3% |
| 4986577 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.56 | 41.0 | 3.93e-01 | 95.9% | 67.3% |
| 5080980 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.56 | 36.0 | 3.55e-01 | 76.5% | 59.1% |
| 4968392 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.55 | 36.0 | 3.62e-01 | 76.5% | 65.0% |
| 3614913 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.54 | 38.0 | 4.01e-01 | 75.5% | 83.5% |
| 4024448 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 48.0 | 4.30e-01 | 100.0% | 71.4% |
| 429988 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.53 | 31.0 | 3.24e-01 | 70.4% | 61.3% |
| 3693121 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.53 | 33.0 | 3.27e-01 | 72.4% | 56.4% |
| 4937410 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.52 | 35.0 | 3.57e-01 | 76.5% | 70.5% |
| 3184366 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.52 | 37.0 | 3.44e-01 | 74.5% | 67.2% |
| 5068892 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.52 | 38.0 | 3.35e-01 | 78.6% | 96.7% |
| 3900243 | 2484.1.1.120 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 | 0.51 | 43.0 | 3.68e-01 | 90.8% | 81.9% |
| 3687564 | 220.1.1.70 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 | 0.50 | 44.0 | 3.90e-01 | 100.0% | 83.3% |
| 3907497 | 2484.1.1.120 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 | 0.50 | 42.0 | 3.30e-01 | 93.9% | 94.5% |
| 3672217 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.50 | 41.0 | 4.12e-01 | 98.0% | 92.0% |
| 3732141 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 44.0 | 3.93e-01 | 100.0% | 80.7% |