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MZ547449.1__QXV72203.1__Acf1_00006__00006

Bact-Vir

MZ547449.1__QXV72203.1__Acf1_00006__00006

Identity

Accession:
MZ547449 ↗
Kingdom:
phage

Quality

93.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-37
PDB
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.19e-01 100.0% 58.3%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.06e-01 100.0% 59.8%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 3.71e-01 100.0% 45.4%
1r1tA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 3.88e-01 100.0% 54.1%
1zkkB00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.64 50.0 3.38e-01 100.0% 24.8%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 3.96e-01 97.1% 61.0%
2l9dA00 3.30.70.2340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF12112 family, DUF3579 0.63 47.0 3.58e-01 100.0% 51.9%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 3.84e-01 100.0% 52.7%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 3.78e-01 100.0% 50.5%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.27e-01 100.0% 87.9%
2ahuA01 3.40.1080.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase 0.61 46.0 2.86e-01 100.0% 16.1%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 4.21e-01 100.0% 79.7%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 3.86e-01 100.0% 70.4%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 3.52e-01 100.0% 40.9%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 3.53e-01 97.1% 56.5%
4kdyB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 40.0 3.13e-01 70.6% 27.5%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.26e-01 100.0% 35.0%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.60e-01 100.0% 54.0%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 45.0 3.90e-01 100.0% 50.7%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.57e-01 100.0% 50.5%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 3.93e-01 97.1% 78.1%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.44e-01 100.0% 59.4%
4bgpA01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.59 41.0 2.95e-01 85.3% 70.9%
1k6dB00 3.40.1080.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase 0.58 43.0 2.74e-01 100.0% 13.7%
2jscB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.59e-01 100.0% 66.3%
4bpe700 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.23e-01 97.1% 49.5%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.41e-01 100.0% 62.2%
4dg8A01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.57 42.0 2.42e-01 85.3% 20.1%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.33e-01 97.1% 60.2%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.38e-01 97.1% 55.6%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.70e-01 100.0% 80.0%
1xviA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.56 44.0 3.36e-01 97.1% 98.9%
3f6oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.26e-01 97.1% 50.5%
5dx9A01 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.55 42.0 3.49e-01 94.1% 70.8%
3bn0A00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.54 44.0 3.34e-01 100.0% 40.0%
2wz1B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.54 41.0 2.68e-01 100.0% 32.7%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.54 43.0 2.91e-01 100.0% 53.5%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.54 39.0 3.14e-01 97.1% 50.5%
4g84A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 37.0 2.29e-01 97.1% 17.1%
2lycA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.54 44.0 3.08e-01 100.0% 37.7%
1dekA02 1.10.238.70 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.53 38.0 2.82e-01 91.2% 27.0%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.27e-01 100.0% 56.7%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.53 39.0 3.06e-01 100.0% 56.4%
1yfbA00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.53 41.0 3.61e-01 85.3% 61.5%
4ncbA02 3.30.70.2620 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 44.0 3.45e-01 100.0% 78.9%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.14e-01 100.0% 68.0%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.40e-01 97.1% 81.2%
3r4cA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 38.0 2.93e-01 100.0% 30.7%
2innB00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.51 44.0 2.45e-01 100.0% 33.9%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.09e-01 85.3% 85.3%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5061423 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.65 47.0 2.77e-01 88.2% 64.9%
316101 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 50.0 3.70e-01 100.0% 45.0%
138903 101.1.2.232 alpha arrays › HTH › HTH › winged helix domain › MLPTv-like_HTH 0.62 48.0 3.49e-01 100.0% 36.9%
3708479 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 4.11e-01 100.0% 65.7%
4929444 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 3.76e-01 100.0% 50.5%
3616024 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 3.94e-01 97.1% 72.0%
3464462 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 2.95e-01 100.0% 27.4%
4977499 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 46.0 3.40e-01 100.0% 47.5%
3799929 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 3.09e-01 97.1% 36.0%
4000154 242.3.1.1 a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I 0.60 48.0 3.45e-01 100.0% 32.5%
4995085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 3.57e-01 100.0% 55.8%
4945402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 3.35e-01 100.0% 40.9%
3533128 101.1.2.506 alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.59 46.0 3.42e-01 100.0% 66.4%
3641281 109.4.1.2665 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_7, PPR_3, E_motif 0.59 44.0 2.46e-01 85.3% 9.1%
4027757 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.58 44.0 2.98e-01 94.1% 34.5%
2884795 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.57 44.0 3.98e-01 91.2% 90.2%
4937548 304.54.1.0 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.56 45.0 3.98e-01 97.1% 72.7%
3993155 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.56 39.0 2.45e-01 85.3% 66.8%
4993775 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.55 42.0 3.61e-01 82.4% 56.4%
4927156 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.27e-01 100.0% 60.0%
3382191 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.55 40.0 2.36e-01 82.4% 15.1%
5003077 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.55 42.0 3.57e-01 97.1% 70.0%
5004332 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.55 42.0 3.53e-01 97.1% 70.0%
4967881 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.55 38.0 3.47e-01 82.4% 50.0%
3803650 109.4.1.1335 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.54 37.0 2.10e-01 85.3% 7.4%
4639978 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.54 41.0 3.58e-01 85.3% 58.2%
5076168 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.54 40.0 3.09e-01 85.3% 37.6%
4986319 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.54 40.0 3.59e-01 82.4% 64.0%
4992345 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.54 41.0 3.78e-01 85.3% 71.1%
4982519 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.54 41.0 3.68e-01 85.3% 64.0%
5065458 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.54 40.0 3.42e-01 85.3% 53.3%
4589022 205.1.1.23 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Nqo3_Fer4 0.53 40.0 3.27e-01 100.0% 60.0%
5044199 1075.1.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.53 43.0 2.58e-01 97.1% 17.4%
4976918 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.25e-01 100.0% 61.1%
3358972 1.1.7.120 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF7271 0.53 35.0 3.22e-01 100.0% 82.7%
5027264 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.53 39.0 3.18e-01 85.3% 47.1%
5004764 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.53 38.0 3.61e-01 85.3% 68.9%
4955487 1.1.3.1 beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.52 39.0 3.69e-01 85.3% 71.1%
4933873 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.52 38.0 3.40e-01 85.3% 56.4%
4880378 205.1.1.35 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.52 38.0 3.18e-01 100.0% 60.0%
5058770 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.52 38.0 3.22e-01 100.0% 65.0%
5027484 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.51 40.0 3.70e-01 85.3% 71.1%
4941025 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.51 39.0 3.57e-01 88.2% 98.0%
3477133 101.1.2.186 alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH 0.51 38.0 2.90e-01 97.1% 53.6%
5031928 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.51 38.0 3.38e-01 85.3% 60.0%
3525132 389.1.1.7 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA 0.51 37.0 3.18e-01 85.3% 33.3%
4989924 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.51 37.0 2.84e-01 100.0% 47.8%
4993826 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.51 37.0 3.42e-01 85.3% 68.8%