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MZ547449.1__QXV72211.1__Acf1_00014__00014

Bact-Vir

MZ547449.1__QXV72211.1__Acf1_00014__00014

Identity

Accession:
MZ547449 ↗
Kingdom:
phage

Quality

87.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acidovorax_phage_ACF1

TaxID: 2856860

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-61
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.72 49.0 3.31e-01 73.1% 68.0%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.71 49.0 3.51e-01 73.1% 58.4%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.16e-01 100.0% 71.4%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.69 57.0 3.99e-01 100.0% 81.5%
7sz2A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.67 58.0 4.86e-01 100.0% 80.4%
2a90A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.67 57.0 4.73e-01 100.0% 76.5%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.25e-01 100.0% 86.5%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 45.0 4.76e-01 73.1% 91.3%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.74e-01 100.0% 59.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 54.0 4.44e-01 100.0% 50.0%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 4.34e-01 100.0% 40.9%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.33e-01 100.0% 44.6%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.64 50.0 5.05e-01 100.0% 84.6%
1wjqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.83e-01 100.0% 64.1%
1wjsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.12e-01 100.0% 39.4%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 56.0 4.02e-01 100.0% 35.5%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.52e-01 100.0% 68.8%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.63 48.0 3.76e-01 90.4% 63.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 4.24e-01 100.0% 60.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 46.0 4.78e-01 100.0% 89.6%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.61 55.0 4.47e-01 100.0% 58.1%
2ou5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 49.0 3.42e-01 90.4% 65.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.60 48.0 4.76e-01 100.0% 83.3%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.60 46.0 3.76e-01 100.0% 44.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.57e-01 100.0% 80.4%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 3.86e-01 100.0% 50.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.58 50.0 4.05e-01 98.1% 95.1%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 45.0 3.49e-01 100.0% 36.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.31e-01 100.0% 70.8%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.56 46.0 4.67e-01 100.0% 96.1%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 47.0 3.40e-01 100.0% 32.7%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 4.33e-01 100.0% 84.2%
2hq4A00 3.40.1600.10 Alpha Beta › 3-Layer(aba) Sandwich › PH1570-like fold › PH1570-like 0.55 40.0 3.00e-01 84.6% 38.0%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 46.0 3.65e-01 100.0% 44.7%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.54 46.0 2.99e-01 100.0% 87.1%
3hrpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.27e-01 100.0% 45.3%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.52 46.0 3.61e-01 100.0% 51.4%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.14e-01 96.2% 91.6%
3h7oA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 38.0 3.16e-01 84.6% 58.0%
3cihA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 38.0 3.05e-01 88.5% 65.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.82e-01 100.0% 71.2%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033600 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 51.0 5.30e-01 71.2% 81.6%
3999634 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.70 60.0 5.19e-01 100.0% 94.1%
5064548 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.69 48.0 4.80e-01 100.0% 71.7%
3574613 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 52.0 4.20e-01 100.0% 43.0%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 52.0 4.48e-01 100.0% 51.8%
4844109 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 52.0 4.69e-01 100.0% 60.6%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.68 51.0 4.92e-01 100.0% 71.7%
3817476 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 51.0 5.24e-01 100.0% 86.0%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 51.0 5.09e-01 100.0% 78.2%
3938589 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 51.0 5.18e-01 100.0% 86.0%
3428486 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 51.0 4.46e-01 100.0% 53.8%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 51.0 5.20e-01 100.0% 86.0%
3222051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 50.0 4.70e-01 100.0% 66.2%
3622846 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 51.0 5.25e-01 100.0% 88.0%
4954284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 48.0 4.64e-01 100.0% 68.3%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 50.0 4.48e-01 100.0% 57.3%
4009281 219.1.1.65 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like 0.65 50.0 4.01e-01 100.0% 42.9%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 5.20e-01 100.0% 85.5%
4321173 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.64 48.0 4.64e-01 100.0% 72.4%
3775592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 48.0 2.55e-01 100.0% 2.8%
3673317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.96e-01 100.0% 83.6%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 48.0 4.94e-01 100.0% 86.0%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 50.0 4.92e-01 100.0% 81.8%
3782293 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.62 45.0 4.46e-01 100.0% 74.5%
4342488 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.38e-01 100.0% 69.8%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 48.0 4.16e-01 100.0% 56.2%
4562486 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.60 50.0 3.61e-01 100.0% 32.3%
3550644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.70e-01 100.0% 81.8%
3270324 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 48.0 4.89e-01 100.0% 92.0%
3881123 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 47.0 4.02e-01 100.0% 52.9%
4938445 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.60 48.0 3.56e-01 100.0% 34.8%
4002896 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 46.0 3.90e-01 100.0% 50.0%
3547084 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 46.0 3.92e-01 100.0% 50.0%
5037849 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.59 46.0 3.59e-01 100.0% 37.6%
4945344 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 48.0 2.98e-01 94.2% 37.2%
3903213 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 45.0 3.14e-01 100.0% 24.6%
4629022 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.58 47.0 4.24e-01 100.0% 64.3%
3883159 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 45.0 3.84e-01 100.0% 50.0%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.58 46.0 4.23e-01 100.0% 65.3%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.28e-01 100.0% 75.0%
3938389 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 46.0 4.00e-01 100.0% 55.3%
3924377 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.60e-01 100.0% 87.3%
4482267 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.57 45.0 3.99e-01 100.0% 58.7%
3963455 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.57 49.0 3.58e-01 100.0% 36.6%
4949848 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.57 42.0 4.16e-01 100.0% 76.4%
3614726 4357.1.1.0 ↗ beta barrels › WWE domain › WWE domain › WWE domain 0.56 46.0 3.73e-01 100.0% 70.8%
4302902 6.1.1.4 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin 0.55 42.0 3.27e-01 88.5% 51.5%
5001903 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 42.0 3.88e-01 100.0% 64.3%
5063433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 40.0 4.11e-01 100.0% 84.0%
5034040 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 4.17e-01 100.0% 83.6%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.17e-01 100.0% 76.7%
4026957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.33e-01 100.0% 81.7%
4432348 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 43.0 3.99e-01 100.0% 69.1%
5025364 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.54 44.0 3.97e-01 100.0% 64.0%
4044896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 3.92e-01 100.0% 64.0%
3387378 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.54 44.0 3.91e-01 100.0% 67.1%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.53 43.0 4.26e-01 100.0% 85.5%
3588727 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 47.0 4.30e-01 100.0% 80.0%
4985969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.15e-01 100.0% 80.0%
4953054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 43.0 3.88e-01 100.0% 64.0%
3588736 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 47.0 4.34e-01 100.0% 86.2%
4936291 4.1.1.487 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7205 0.52 41.0 3.90e-01 100.0% 72.3%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 4.06e-01 100.0% 79.4%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.87e-01 100.0% 83.6%
D2 medium residues 65-109
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tgnA01 6.10.250.2360 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.68 41.0 4.65e-01 80.0% 80.0%
3h8vB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 50.0 3.21e-01 88.9% 21.6%