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MZ568826.1__QYW06101.1__KASIA_p057__00057

Bact-Vir

MZ568826.1__QYW06101.1__KASIA_p057__00057

Identity

Accession:
MZ568826 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shewanella_phage_vB_SspS_KASIA

TaxID: 2866686

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-81
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.81 71.0 6.07e-01 100.0% 92.7%
1hjrA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 50.0 3.50e-01 78.4% 23.4%
2j62A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.69 48.0 2.92e-01 72.5% 16.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4392278 604.12.1.9 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 0.85 76.0 5.33e-01 100.0% 58.1%
3722140 137.1.1.0 ↗ alpha bundles › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors 0.85 77.0 6.59e-01 100.0% 90.0%
3951222 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.70 59.0 5.44e-01 100.0% 91.4%
3995550 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.69 53.0 4.25e-01 86.3% 43.0%
4944511 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.55 44.0 2.73e-01 88.2% 20.7%