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MZ568826.1__QYW06136.1__KASIA_p092__00092
Bact-VirMZ568826.1__QYW06136.1__KASIA_p092__00092
Identity
- Accession:
- MZ568826 ↗
- Kingdom:
- phage
Quality
69.3
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 81-148
D2
medium
residues 162-262
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pswA01 | 3.90.360.10 | Alpha Beta › Alpha-Beta Complex › Histone Acetyltransferase; domain 1 › Histone acetyl transferase 1 (HAT1), N-terminal domain | 0.52 | 34.0 | 3.15e-01 | 92.1% | 49.6% |
| 4ckmB00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.51 | 36.0 | 3.23e-01 | 73.3% | 91.7% |
| 2nwhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 43.0 | 3.14e-01 | 97.0% | 96.7% |
| 2y3aA01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 36.0 | 2.63e-01 | 75.2% | 62.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4021776 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.54 | 46.0 | 3.90e-01 | 95.0% | 93.1% |
| 3740185 | 386.1.1.16 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Hat1_N | 0.54 | 36.0 | 3.65e-01 | 93.1% | 66.7% |
| 3728407 | 386.1.1.16 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Hat1_N | 0.54 | 38.0 | 3.66e-01 | 93.1% | 64.3% |
| 4018114 | 386.1.1.16 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Hat1_N | 0.54 | 38.0 | 3.65e-01 | 93.1% | 64.3% |
| 4028831 | 221.1.1.16 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TGS | 0.53 | 31.0 | 3.49e-01 | 74.3% | 76.0% |
| 3790616 | 386.1.1.16 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Hat1_N | 0.52 | 36.0 | 3.46e-01 | 95.0% | 60.8% |
| 3472403 | 386.1.1.16 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Hat1_N | 0.51 | 34.0 | 3.32e-01 | 92.1% | 60.0% |
| 4434965 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.68e-01 | 88.1% | 73.7% |
| 4981966 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.51 | 36.0 | 2.95e-01 | 78.2% | 38.0% |
| 4959043 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.51 | 34.0 | 3.16e-01 | 87.1% | 53.1% |
| 4990174 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.50 | 38.0 | 2.90e-01 | 79.2% | 72.6% |
D3
medium
residues 263-449
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.75 | 24.0 | 4.11e-01 | 100.0% | 82.1% |
| 1s5jA03 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.59 | 36.0 | 4.00e-01 | 100.0% | 73.9% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 29.0 | 3.92e-01 | 81.8% | 91.6% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 29.0 | 3.83e-01 | 80.7% | 94.9% |
| 4jrfA03 | 1.10.20.150 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.54 | 30.0 | 3.83e-01 | 98.9% | 92.5% |
| 1oltA02 | 1.10.10.920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 25.0 | 3.55e-01 | 89.8% | 100.0% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 31.0 | 3.22e-01 | 100.0% | 62.2% |
| 6n59A02 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 22.0 | 3.17e-01 | 97.9% | 85.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3690781 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.93 | 37.0 | 5.49e-01 | 95.2% | 78.9% |
| 4946311 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.77 | 30.0 | 4.80e-01 | 100.0% | 92.0% |
| 3683037 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.70 | 38.0 | 5.02e-01 | 97.3% | 91.8% |
| 4949564 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.68 | 23.0 | 3.92e-01 | 100.0% | 91.7% |
| 3596109 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.63 | 41.0 | 4.97e-01 | 98.9% | 95.4% |
| 4626202 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.63 | 35.0 | 4.61e-01 | 99.5% | 94.5% |
| 4807860 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.61 | 47.0 | 4.66e-01 | 78.1% | 97.9% |
| 3291547 | 601.1.1.84 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF350 | 0.61 | 31.0 | 3.56e-01 | 95.2% | 63.4% |
| 3958184 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 33.0 | 3.66e-01 | 100.0% | 65.8% |
| 5000652 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.59 | 43.0 | 4.39e-01 | 100.0% | 76.7% |
| 3245966 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.59 | 41.0 | 4.84e-01 | 98.9% | 95.7% |
| 3868177 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.53 | 43.0 | 4.66e-01 | 99.5% | 96.9% |
| 3494350 | 631.1.1.1 ↗ | alpha arrays › Glycolipid transfer protein, GLTP › Glycolipid transfer protein, GLTP › Glycolipid transfer protein, GLTP › GLTP | 0.52 | 39.0 | 3.47e-01 | 77.5% | 95.6% |
| 4345162 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.51 | 42.0 | 4.52e-01 | 98.9% | 98.1% |
| 4220398 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.51 | 44.0 | 4.68e-01 | 98.9% | 98.8% |