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MZ568826.1__QYW06143.1__KASIA_p099__00099

Bact-Vir

MZ568826.1__QYW06143.1__KASIA_p099__00099

Identity

Accession:
MZ568826 ↗
Kingdom:
phage

Quality

81.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shewanella_phage_vB_SspS_KASIA

TaxID: 2866686

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-107
PDB
Domain cluster: rep: scnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00035__D13-85
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 49.0 4.59e-01 73.2% 54.7%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 46.0 4.45e-01 70.1% 57.4%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 41.0 4.92e-01 72.2% 87.7%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 34.0 3.99e-01 77.3% 86.6%
2i9xA00 3.30.1120.40 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Stage V sporulation protein G 0.55 30.0 3.24e-01 82.5% 59.3%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 27.0 3.30e-01 90.7% 72.6%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 38.0 4.10e-01 89.7% 82.6%
2gaiA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.54 43.0 4.04e-01 88.7% 89.4%
3pnrA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 35.0 2.69e-01 70.1% 37.9%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 36.0 3.44e-01 72.2% 98.3%
1cyyA02 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.51 41.0 3.84e-01 90.7% 92.0%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.50 36.0 3.03e-01 75.3% 55.5%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3557649 4.8.1.20 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N 0.73 47.0 4.59e-01 73.2% 60.0%
3750522 4.1.1.218 ↗ beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N 0.73 47.0 4.50e-01 73.2% 57.3%
145843 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.73 46.0 4.45e-01 70.1% 57.4%
3473981 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.73 52.0 4.69e-01 73.2% 70.4%
3826141 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.12e-01 70.1% 77.8%
3342228 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.71 49.0 3.99e-01 71.1% 82.9%
3447797 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.69 49.0 4.20e-01 73.2% 81.3%
3833618 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.69 48.0 4.13e-01 71.1% 84.1%
3423907 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.68 47.0 3.94e-01 72.2% 83.0%
3258054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 47.0 4.09e-01 73.2% 96.6%
3997130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 44.0 4.40e-01 70.1% 83.0%
3676628 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.61 43.0 4.01e-01 72.2% 70.8%
3911618 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.61 41.0 3.44e-01 70.1% 79.4%
3881192 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 43.0 3.51e-01 74.2% 45.3%
3224728 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 43.0 4.06e-01 82.5% 100.0%
5036880 330.1.1.35 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › LeuA_dimer 0.55 37.0 4.24e-01 71.1% 95.7%
3619212 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 43.0 3.01e-01 83.5% 63.9%
4768540 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.55 43.0 3.23e-01 84.5% 85.7%
4096366 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.55 37.0 3.45e-01 70.1% 96.8%
4393122 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 37.0 3.40e-01 76.3% 54.4%
4124320 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 46.0 4.10e-01 89.7% 95.4%
3739762 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 37.0 3.42e-01 70.1% 95.8%
4570530 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 36.0 3.54e-01 76.3% 64.4%
4579550 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 36.0 3.32e-01 76.3% 52.3%
4609098 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 45.0 4.00e-01 89.7% 91.9%
4240105 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 37.0 3.47e-01 76.3% 59.1%
4954798 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 37.0 3.39e-01 76.3% 56.1%
4507935 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 36.0 3.33e-01 76.3% 55.3%
4529819 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 36.0 3.23e-01 70.1% 85.9%
4289288 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 38.0 3.46e-01 76.3% 57.0%
3409241 223.2.1.31 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_2 0.52 42.0 3.47e-01 86.6% 82.3%
3965319 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 36.0 3.38e-01 70.1% 94.8%
4268775 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 36.0 3.32e-01 72.2% 55.2%
4956937 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.52 46.0 3.21e-01 100.0% 90.9%
5066760 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 43.0 3.97e-01 88.7% 100.0%
4640527 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 36.0 3.33e-01 72.2% 88.0%
4977218 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 41.0 2.76e-01 94.8% 23.5%
4228218 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 43.0 3.85e-01 89.7% 91.7%
3685150 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 39.0 3.22e-01 80.4% 49.1%