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MZ568827.1__QYW06228.1__MuM161_p39__00039
Bact-VirMZ568827.1__QYW06228.1__MuM161_p39__00039
Identity
- Accession:
- MZ568827 ↗
- Kingdom:
- phage
Quality
68.2
mean pLDDT
Taxonomy
TaxID: 2866687
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-61
Domain cluster:
rep: KT381864.1__ALF02055.1__vBThpSP1_016__00016__D76-126
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17891.7 best | FluMu_N | 49.6 | 3.50e-13 | 94.4% | 89.8% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2outA01 | 3.40.5.80 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.72 | 58.0 | 5.79e-01 | 98.1% | 89.5% |
| 1x31C02 | 3.30.70.1520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Heterotetrameric sarcosine oxidase | 0.67 | 56.0 | 5.01e-01 | 98.1% | 98.8% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.62 | 47.0 | 4.50e-01 | 100.0% | 69.7% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.61 | 49.0 | 4.27e-01 | 100.0% | 85.4% |
| 2lsmA00 | 3.40.5.70 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › DNA packaging chaperone protein FI, C-terminal beta-strand domain | 0.60 | 49.0 | 4.76e-01 | 92.6% | 86.9% |
| 3up1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 3.97e-01 | 94.4% | 82.7% |
| 2byeA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 47.0 | 3.87e-01 | 100.0% | 50.5% |
| 1y7xA02 | 2.30.30.550 | Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat | 0.57 | 44.0 | 4.36e-01 | 100.0% | 85.7% |
| 6uf3A00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.57 | 47.0 | 3.13e-01 | 100.0% | 26.4% |
| 1jwwA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 44.0 | 4.07e-01 | 98.1% | 91.3% |
| 1wftA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.74e-01 | 94.4% | 90.4% |
| 2gmlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.56 | 45.0 | 4.19e-01 | 100.0% | 100.0% |
| 1uhvA01 | 2.60.40.1500 | Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 | 0.56 | 41.0 | 3.07e-01 | 85.2% | 87.8% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.55 | 45.0 | 4.33e-01 | 100.0% | 79.4% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 37.0 | 3.26e-01 | 85.2% | 43.8% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.55 | 44.0 | 3.25e-01 | 100.0% | 50.6% |
| 2j8bA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 38.0 | 3.47e-01 | 100.0% | 55.1% |
| 4f3jA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.28e-01 | 100.0% | 59.4% |
| 4iltC00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.52 | 41.0 | 3.17e-01 | 100.0% | 73.5% |
| 1nxuA02 | 3.30.1370.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain | 0.51 | 38.0 | 2.93e-01 | 87.0% | 80.5% |
| 3blvC00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.51 | 42.0 | 2.64e-01 | 100.0% | 46.4% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 34.0 | 2.90e-01 | 70.4% | 51.6% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 38.0 | 3.25e-01 | 100.0% | 48.5% |
| 1ywhC03 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.50 | 44.0 | 3.74e-01 | 100.0% | 89.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5010 | 4076.3.1.4 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › FluMu_N | 0.71 | 59.0 | 5.56e-01 | 100.0% | 77.6% |
| 3266009 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.68 | 55.0 | 5.49e-01 | 100.0% | 89.1% |
| 3963438 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.65 | 55.0 | 5.29e-01 | 100.0% | 96.9% |
| 5008499 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.65 | 56.0 | 4.56e-01 | 100.0% | 95.2% |
| 4949196 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.64 | 54.0 | 5.27e-01 | 100.0% | 95.0% |
| 3716713 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.64 | 49.0 | 5.05e-01 | 92.6% | 94.0% |
| 5023430 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.64 | 52.0 | 5.09e-01 | 100.0% | 93.3% |
| 4951587 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.64 | 49.0 | 5.09e-01 | 94.4% | 94.0% |
| 4933005 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.62 | 48.0 | 4.75e-01 | 96.3% | 81.7% |
| 4946034 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.59 | 48.0 | 4.38e-01 | 100.0% | 86.3% |
| 5062189 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.58 | 51.0 | 4.59e-01 | 100.0% | 88.0% |
| 4448589 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.58 | 48.0 | 4.13e-01 | 100.0% | 89.5% |
| 3878540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 3.92e-01 | 90.7% | 83.5% |
| 3174929 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.56 | 46.0 | 4.27e-01 | 100.0% | 100.0% |
| 3976468 | 7523.1.1.25 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Phosphonate-bd | 0.55 | 41.0 | 3.03e-01 | 81.5% | 71.0% |
| 199962 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.55 | 45.0 | 4.33e-01 | 100.0% | 79.4% |
| 5051645 | 205.1.1.131 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 | 0.55 | 45.0 | 4.05e-01 | 100.0% | 100.0% |
| 7175 | 862.1.1.2 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DUF1882 | 0.55 | 44.0 | 3.25e-01 | 100.0% | 50.6% |
| 4321638 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.55 | 44.0 | 4.13e-01 | 100.0% | 100.0% |
| 3478442 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.54 | 46.0 | 2.96e-01 | 100.0% | 24.6% |
| 4941559 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 41.0 | 3.44e-01 | 87.0% | 100.0% |
| 3589536 | 268.2.1.1 ↗ | a+b two layers › Sterol carrier protein-like › LytR-Cps2A-Psr (LCP) enzymes › LytR-Cps2A-Psr (LCP) enzymes › LytR_cpsA_psr | 0.52 | 42.0 | 2.78e-01 | 100.0% | 23.9% |
| 3863856 | 382.1.1.16 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › CD59 | 0.52 | 37.0 | 3.36e-01 | 100.0% | 53.8% |
| 5038120 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.11e-01 | 90.7% | 86.9% |
| 3249488 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.44e-01 | 94.4% | 84.8% |
| 3989524 | 304.147.1.1 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain › DapH_N | 0.52 | 42.0 | 4.20e-01 | 100.0% | 98.2% |
| 4878969 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.51 | 40.0 | 3.11e-01 | 90.7% | 75.7% |