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MZ568828.1__QYW06246.1__MuM162_p05__00005

Bact-Vir

MZ568828.1__QYW06246.1__MuM162_p05__00005

Identity

Accession:
MZ568828 ↗
Kingdom:
phage

Quality

79.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shewanella_phage_vB_SspM_MuM16-2

TaxID: 2866685

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-67
PDB
Domain cluster: rep: Ig7659_scaffold_8_prodigal-single.1__X__X__00011__D16-69
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 41.0 3.31e-01 89.7% 35.5%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 40.0 3.51e-01 72.4% 84.6%
7syvx01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 38.0 3.00e-01 82.8% 41.6%
1fnoA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 39.0 2.61e-01 91.4% 83.4%
2hz7A05 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.51 36.0 2.85e-01 96.6% 34.4%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.50 39.0 2.54e-01 93.1% 48.1%
2wb7A02 2.60.40.2050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 36.0 2.73e-01 77.6% 60.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945449 3987.1.1.1 ↗ a+b complex topology › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › N6_N4_Mtase 0.63 45.0 3.89e-01 75.9% 78.9%
3978182 209.1.1.6 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD 0.56 46.0 3.61e-01 98.3% 98.6%
3716128 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.54 43.0 2.76e-01 87.9% 33.8%
5024742 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.53 34.0 2.80e-01 98.3% 32.5%
3198325 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 39.0 2.42e-01 79.3% 26.0%
3561483 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 41.0 2.59e-01 100.0% 18.1%
4941947 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.51 33.0 2.63e-01 98.3% 27.9%
4206331 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 42.0 3.90e-01 100.0% 72.0%
184962 11.1.1.338 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › T26-6p_Ig-like_dom 0.50 36.0 2.50e-01 77.6% 56.3%
3245756 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.50 30.0 3.55e-01 93.1% 100.0%