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MZ568828.1__QYW06264.1__MuM162_p23__00023
Bact-VirMZ568828.1__QYW06264.1__MuM162_p23__00023
Identity
- Accession:
- MZ568828 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 2866685
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-70
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01258.24 best | zf-dskA_traR | 28.2 | 2.10e-06 | 92.3% | 83.3% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kq9A00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.85 | 70.0 | 4.99e-01 | 92.3% | 100.0% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.80 | 71.0 | 4.83e-01 | 100.0% | 30.0% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.79 | 70.0 | 4.64e-01 | 100.0% | 26.9% |
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.73 | 59.0 | 4.89e-01 | 87.2% | 61.5% |
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.66 | 57.0 | 4.52e-01 | 100.0% | 60.0% |
| 4qf3A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 53.0 | 4.79e-01 | 94.9% | 91.2% |
| 2m3lA00 | 3.30.240.40 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein | 0.65 | 49.0 | 4.11e-01 | 87.2% | 61.8% |
| 4n4fA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 46.0 | 4.63e-01 | 79.5% | 87.5% |
| 7zj3D01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 48.0 | 3.94e-01 | 94.9% | 48.1% |
| 6xi7B02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 44.0 | 4.49e-01 | 84.6% | 82.1% |
| 1x4wA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.59 | 49.0 | 4.21e-01 | 100.0% | 58.2% |
| 1rfhA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 43.0 | 4.27e-01 | 82.1% | 80.5% |
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 45.0 | 3.79e-01 | 97.4% | 49.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3386557 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.97 | 78.0 | 7.74e-01 | 97.4% | 82.5% |
| 3164830 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.94 | 73.0 | 7.25e-01 | 82.1% | 80.0% |
| 3964897 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.93 | 75.0 | 7.27e-01 | 100.0% | 79.1% |
| 4057746 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.92 | 72.0 | 7.18e-01 | 84.6% | 82.5% |
| 1246518 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.87 | 69.0 | 7.25e-01 | 97.4% | 100.0% |
| 4406909 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.86 | 68.0 | 6.45e-01 | 97.4% | 73.3% |
| 4291301 | 192.10.1.8 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › zf-dskA_traR | 0.84 | 77.0 | 5.27e-01 | 100.0% | 32.5% |
| 3973966 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.83 | 73.0 | 5.21e-01 | 94.9% | 37.0% |
| 4326544 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.82 | 74.0 | 5.04e-01 | 100.0% | 31.2% |
| 4557378 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.77 | 57.0 | 4.08e-01 | 79.5% | 29.5% |
| 4024577 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.74 | 64.0 | 5.30e-01 | 100.0% | 60.0% |
| 5021070 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.71 | 58.0 | 6.08e-01 | 89.7% | 100.0% |
| 3186953 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 56.0 | 5.76e-01 | 92.3% | 100.0% |
| 3809619 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 59.0 | 5.38e-01 | 97.4% | 90.9% |
| 119208 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.70 | 60.0 | 4.59e-01 | 97.4% | 46.6% |
| 4207020 | 377.1.3.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › zf-FPG_IleRS | 0.69 | 53.0 | 5.69e-01 | 89.7% | 100.0% |
| 3222905 | 377.1.1.9 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › XPA_N | 0.67 | 49.0 | 5.10e-01 | 84.6% | 88.6% |
| 3805840 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.67 | 49.0 | 4.62e-01 | 82.1% | 68.0% |
| 3417508 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.67 | 48.0 | 4.53e-01 | 79.5% | 78.0% |
| 3926105 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.66 | 54.0 | 4.33e-01 | 92.3% | 82.5% |
| 5065866 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 46.0 | 4.44e-01 | 89.7% | 78.0% |
| 3313010 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 51.0 | 4.79e-01 | 94.9% | 96.0% |
| 3936791 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 48.0 | 3.97e-01 | 100.0% | 50.6% |
| 3431728 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 49.0 | 4.48e-01 | 100.0% | 81.8% |
| 3302328 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.58 | 46.0 | 4.38e-01 | 100.0% | 74.0% |