←Back to structures
MZ568829.1__QYW06312.1__M163_p22__00022
Bact-VirMZ568829.1__QYW06312.1__M163_p22__00022
Identity
- Accession:
- MZ568829 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Peduoviridae›
Arsenicumvirus›
Shewanella_phage_vB_SspM_M16-3
TaxID: 2866684
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-180
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 27.0 | 2.78e-01 | 95.8% | 39.6% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 27.0 | 3.17e-01 | 90.8% | 57.3% |
| 2zomA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 27.0 | 3.09e-01 | 90.8% | 55.1% |
| 4iyqA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 26.0 | 3.04e-01 | 88.0% | 53.3% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 27.0 | 3.15e-01 | 90.8% | 57.7% |
| 1burS00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.58 | 43.0 | 4.63e-01 | 83.1% | 91.1% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 28.0 | 3.34e-01 | 90.8% | 77.3% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.52 | 32.0 | 3.75e-01 | 76.1% | 90.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 222842 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.62 | 27.0 | 3.12e-01 | 90.8% | 54.7% |
| 3929299 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.58 | 45.0 | 3.79e-01 | 80.3% | 86.5% |
| 3509491 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.53 | 27.0 | 3.03e-01 | 95.8% | 61.8% |
| 3927896 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.52 | 37.0 | 3.12e-01 | 73.2% | 75.9% |
| 3587922 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.51 | 36.0 | 3.18e-01 | 70.4% | 73.8% |
| 3573640 | 11.2.1.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PKC_C2 | 0.51 | 35.0 | 3.68e-01 | 71.8% | 79.2% |