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MZ573780.2__QYC50890.1__X__00195

Bact-Vir

MZ573780.2__QYC50890.1__X__00195

Identity

Accession:
MZ573780 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Mammaliicoccus_phage_vB_MscM-PMS3

TaxID: 2861056

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-61
PDB
Domain cluster: rep: OM350012.1__ULF48960.1__X__00047__D91-151
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.37e-01 100.0% 68.2%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.62e-01 100.0% 76.7%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.42e-01 100.0% 69.7%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 53.0 5.69e-01 98.3% 91.8%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 63.0 5.74e-01 96.6% 82.9%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.72 56.0 5.64e-01 100.0% 86.0%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 61.0 5.55e-01 96.6% 84.4%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 5.63e-01 100.0% 79.4%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.41e-01 100.0% 74.6%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.31e-01 100.0% 71.6%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.68 53.0 5.51e-01 100.0% 92.6%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 4.90e-01 96.6% 62.7%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.44e-01 100.0% 78.9%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.39e-01 100.0% 90.9%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 58.0 5.82e-01 100.0% 100.0%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 58.0 5.31e-01 100.0% 80.5%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 5.21e-01 100.0% 84.0%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 5.35e-01 100.0% 78.7%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 4.83e-01 100.0% 59.0%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 5.37e-01 100.0% 79.5%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 51.0 5.36e-01 96.6% 96.2%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 5.33e-01 100.0% 86.2%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 57.0 5.43e-01 100.0% 85.3%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 5.63e-01 98.3% 100.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 5.15e-01 87.9% 100.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 5.47e-01 93.1% 100.0%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 56.0 5.28e-01 100.0% 81.7%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 57.0 5.07e-01 98.3% 75.3%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 56.0 5.09e-01 100.0% 80.8%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 56.0 4.59e-01 100.0% 57.1%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 55.0 5.34e-01 100.0% 87.9%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 5.22e-01 98.3% 92.5%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 50.0 5.04e-01 100.0% 86.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 55.0 5.51e-01 98.3% 100.0%
1mw7A02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.61 42.0 3.72e-01 72.4% 97.7%
1u04A02 3.90.70.180 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 51.0 4.13e-01 93.1% 81.2%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.96e-01 96.6% 100.0%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.91e-01 100.0% 84.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.60 48.0 5.01e-01 93.1% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 4.76e-01 100.0% 75.9%
4bwxA03 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 44.0 4.08e-01 82.8% 85.0%
1konA02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.60 42.0 3.66e-01 100.0% 47.8%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 54.0 4.30e-01 100.0% 75.2%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 4.71e-01 100.0% 85.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 47.0 4.70e-01 96.6% 86.4%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 4.17e-01 100.0% 72.6%
2kqaA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.58 46.0 3.66e-01 100.0% 42.5%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 49.0 4.81e-01 98.3% 86.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.04e-01 100.0% 67.1%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 49.0 4.65e-01 100.0% 86.1%
1xjhA00 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.57 41.0 4.06e-01 79.3% 77.4%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.55 40.0 4.10e-01 82.8% 87.7%
2vugA03 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.54 44.0 3.73e-01 94.8% 95.1%
1juvA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.54 42.0 3.04e-01 91.4% 43.0%
1xjkA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.53 42.0 2.44e-01 94.8% 13.0%
2bh8B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 40.0 4.08e-01 86.2% 90.9%
8hnzA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 38.0 2.31e-01 79.3% 39.8%
2j6aA00 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 38.0 3.07e-01 87.9% 95.6%
1et9A01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 42.0 3.54e-01 100.0% 88.2%
1md6A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 43.0 3.24e-01 100.0% 98.7%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1482194 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.76 56.0 5.62e-01 100.0% 76.7%
3929372 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 62.0 5.72e-01 93.1% 82.7%
167340 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.73 53.0 5.69e-01 98.3% 91.8%
3617677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 5.54e-01 94.8% 87.5%
3388630 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 62.0 5.60e-01 96.6% 85.0%
3221547 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.68e-01 98.3% 85.0%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 55.0 5.34e-01 100.0% 73.8%
5077969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.19e-01 100.0% 63.7%
3886138 4.1.1.340 ↗ beta barrels › SH3 › SH3 › SH3 › PF28930 0.72 65.0 5.46e-01 100.0% 69.5%
3190835 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.71 55.0 4.86e-01 94.8% 57.6%
3895155 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.58e-01 98.3% 80.0%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.70 54.0 5.13e-01 98.3% 70.0%
3766287 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 62.0 5.18e-01 100.0% 70.0%
4024914 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.70 52.0 5.17e-01 93.1% 76.7%
3622846 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 55.0 5.88e-01 100.0% 100.0%
3784968 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 63.0 5.61e-01 100.0% 88.7%
3591870 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 4.63e-01 98.3% 96.2%
3969006 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.69 45.0 4.94e-01 100.0% 86.7%
5037228 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 59.0 5.72e-01 100.0% 84.6%
3609116 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 54.0 4.27e-01 100.0% 41.9%
3813787 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 4.81e-01 98.3% 94.7%
4996021 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.31e-01 100.0% 68.8%
4574546 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 57.0 5.48e-01 100.0% 80.0%
4004704 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.69 45.0 4.91e-01 100.0% 86.7%
3347851 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 52.0 4.93e-01 100.0% 68.6%
3883725 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.84e-01 100.0% 95.6%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 4.59e-01 98.3% 56.5%
4589595 4.1.1.447 ↗ beta barrels › SH3 › SH3 › SH3 › PF28065 0.68 54.0 5.22e-01 100.0% 76.9%
3593222 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 4.75e-01 100.0% 61.0%
3766868 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 59.0 5.07e-01 98.3% 71.1%
4034320 4.1.1.398 ↗ beta barrels › SH3 › SH3 › SH3 › YolD 0.66 55.0 5.24e-01 100.0% 77.9%
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 5.01e-01 94.8% 85.5%
2893010 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.65 51.0 5.29e-01 96.6% 92.6%
3434094 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.65 59.0 4.99e-01 100.0% 82.1%
5036497 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.65 58.0 5.21e-01 100.0% 72.5%
4948069 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.30e-01 100.0% 80.0%
3270519 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 58.0 5.61e-01 100.0% 93.8%
1549365 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.64 57.0 5.06e-01 100.0% 74.7%
3473924 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 57.0 5.54e-01 98.3% 100.0%
3735964 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.90e-01 93.1% 71.2%
3503254 4007.1.1.0 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins 0.63 44.0 4.01e-01 100.0% 52.4%
3483363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.20e-01 98.3% 84.6%
4485354 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.63 56.0 4.77e-01 100.0% 61.7%
4231372 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.63 55.0 5.22e-01 100.0% 94.3%
4012002 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 5.30e-01 100.0% 91.4%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 53.0 4.04e-01 98.3% 40.7%
3181191 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.30e-01 96.6% 56.5%
4289852 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.61 42.0 3.75e-01 100.0% 49.4%
5054505 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.61 53.0 4.65e-01 100.0% 92.2%
3576438 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.21e-01 98.3% 56.7%
5006740 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.61 50.0 4.20e-01 100.0% 54.8%
3449268 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 54.0 4.79e-01 100.0% 72.9%
3320142 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.61 42.0 3.80e-01 100.0% 50.6%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 54.0 4.10e-01 100.0% 45.2%
3626327 4007.1.1.0 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins 0.60 43.0 3.93e-01 100.0% 54.1%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.60 50.0 4.71e-01 98.3% 75.3%
4150387 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.60 42.0 3.75e-01 100.0% 50.6%
3911035 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.60 53.0 3.88e-01 100.0% 86.5%
3938908 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.95e-01 100.0% 85.7%
5032461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 5.04e-01 100.0% 89.2%
4667951 4007.1.1.0 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins 0.60 42.0 3.69e-01 100.0% 47.8%
4120969 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.59 41.0 3.50e-01 100.0% 41.0%
3511551 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 48.0 4.85e-01 94.8% 90.0%
5017559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.83e-01 100.0% 98.5%
3213215 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.12e-01 100.0% 83.5%
4032267 2.1.1.221 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6414 0.57 41.0 3.47e-01 79.3% 71.8%
3286798 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 39.0 3.12e-01 72.4% 72.0%
3463688 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.55 48.0 3.25e-01 100.0% 38.7%
4065083 4203.1.1.1 ↗ few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 0.55 40.0 4.09e-01 79.3% 87.3%
3602503 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.55 45.0 3.75e-01 100.0% 95.0%
5053654 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 35.0 2.87e-01 89.7% 36.7%