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MZ592922.1__QYW05998.1__X__00103

Bact-Vir

MZ592922.1__QYW05998.1__X__00103

Identity

Accession:
MZ592922 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.71 53.0 3.42e-01 77.9% 21.9%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 50.0 3.11e-01 75.0% 80.5%
2xzmW01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.68 47.0 3.87e-01 72.1% 72.0%
3fdjA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.65 39.0 3.16e-01 97.1% 32.0%
3kbgA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.64 46.0 4.31e-01 73.5% 92.6%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.62 53.0 4.74e-01 100.0% 70.7%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 53.0 3.45e-01 100.0% 93.2%
6cngA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.60 36.0 2.96e-01 97.1% 32.0%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 46.0 3.76e-01 83.8% 84.1%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 51.0 3.33e-01 97.1% 85.4%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 50.0 3.36e-01 98.5% 68.5%
3ed3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 43.0 3.54e-01 77.9% 86.0%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 52.0 3.31e-01 100.0% 93.7%
3e5zA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 49.0 3.29e-01 98.5% 84.1%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.13e-01 97.1% 58.8%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.57 43.0 4.09e-01 80.9% 77.5%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 49.0 3.21e-01 98.5% 85.4%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.57 48.0 4.47e-01 97.1% 76.4%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 39.0 2.48e-01 73.5% 23.8%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 47.0 3.20e-01 95.6% 79.1%
3g4eA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 46.0 3.11e-01 97.1% 82.2%
2z4hA02 2.40.50.540 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain 0.55 34.0 3.26e-01 73.5% 48.8%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 37.0 2.81e-01 70.6% 81.3%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.55 40.0 3.68e-01 91.2% 60.0%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.54 37.0 2.22e-01 85.3% 9.0%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 44.0 2.91e-01 95.6% 54.7%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 44.0 2.94e-01 100.0% 39.0%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 40.0 3.58e-01 83.8% 61.0%
4iq0C02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 45.0 3.40e-01 98.5% 89.5%
2jo6A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.53 44.0 3.87e-01 98.5% 90.0%
2x1cB01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.52 44.0 3.00e-01 100.0% 79.4%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.52 42.0 3.56e-01 94.1% 78.4%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 40.0 3.58e-01 89.7% 59.3%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 46.0 2.89e-01 98.5% 98.9%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.55e-01 100.0% 48.9%
4z9mB02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.51 42.0 3.10e-01 92.6% 52.0%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.63e-01 100.0% 84.3%
5r0dB01 2.60.34.20 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › 0.51 42.0 3.35e-01 92.6% 65.7%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.51 40.0 3.58e-01 85.3% 74.7%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 42.0 3.17e-01 89.7% 39.9%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 2.89e-01 92.6% 96.6%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 42.0 3.60e-01 100.0% 95.0%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4797890 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.69 58.0 5.44e-01 97.1% 83.5%
3177260 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.69 60.0 4.16e-01 100.0% 30.2%
4671179 221.1.2.7 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › RS4NT 0.68 49.0 4.00e-01 75.0% 72.5%
5004274 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.68 54.0 5.23e-01 92.6% 78.7%
3263503 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.67 47.0 4.61e-01 91.2% 66.7%
5073366 221.1.2.0 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.66 47.0 4.23e-01 75.0% 82.1%
5066776 221.1.2.20 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e 0.65 48.0 3.97e-01 76.5% 66.1%
3241605 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 53.0 3.46e-01 92.6% 83.5%
5040009 5.1.3.22 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH 0.64 53.0 3.37e-01 92.6% 85.8%
3306543 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.63 46.0 4.58e-01 98.5% 74.3%
3210934 77.3.1.7 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF31062 0.62 39.0 3.36e-01 70.6% 41.0%
4302456 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.61 53.0 4.87e-01 100.0% 78.9%
4428983 5.1.4.321 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 0.61 51.0 3.14e-01 95.6% 97.6%
3899940 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.61 49.0 4.64e-01 97.1% 73.8%
4121107 5.1.4.24 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBP56 0.61 53.0 3.31e-01 100.0% 85.8%
3736971 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.60 52.0 3.28e-01 98.5% 76.9%
4978135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 42.0 3.26e-01 72.1% 62.8%
5048260 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 43.0 3.32e-01 75.0% 63.2%
3659226 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.60 52.0 3.58e-01 95.6% 62.6%
3581513 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.60 45.0 4.28e-01 98.5% 67.5%
5002442 5.1.3.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TrAA12 0.60 49.0 3.13e-01 91.2% 44.8%
2538670 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.59 40.0 4.34e-01 70.6% 90.7%
3266245 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 4.07e-01 94.1% 90.8%
3598831 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 46.0 4.11e-01 92.6% 60.0%
3911194 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.58 42.0 4.00e-01 92.6% 63.7%
4267686 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.58 49.0 3.30e-01 98.5% 80.3%
3710489 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.57 46.0 4.04e-01 92.6% 58.1%
3622446 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.57 43.0 4.28e-01 98.5% 74.3%
4949939 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 40.0 3.18e-01 73.5% 62.8%
3921414 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.57 39.0 3.72e-01 86.8% 60.8%
3294274 5.1.5.95 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Det1 0.57 47.0 2.90e-01 95.6% 37.8%
3380828 5.1.3.131 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Det1 0.57 47.0 2.94e-01 95.6% 35.2%
4271896 5.1.3.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SdiA-regulated 0.57 47.0 3.22e-01 97.1% 52.1%
3488314 5.1.4.302 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EML 0.57 46.0 2.99e-01 95.6% 53.2%
3230371 3180.1.1.0 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.56 49.0 4.20e-01 98.5% 80.9%
4433757 3347.1.1.3 beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531 0.56 49.0 2.99e-01 98.5% 56.0%
3888630 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.56 48.0 3.61e-01 98.5% 94.4%
3272453 6.1.1.7 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CDtoxinA 0.56 46.0 3.75e-01 95.6% 47.4%
4210618 3735.1.1.12 beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell 0.56 49.0 2.97e-01 98.5% 56.0%
3769418 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 48.0 3.34e-01 95.6% 82.7%
143915 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.55 45.0 2.91e-01 94.1% 68.5%
5026271 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.55 47.0 4.10e-01 100.0% 92.7%
3617714 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.55 42.0 4.05e-01 97.1% 70.7%
3534889 5.1.5.95 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Det1 0.54 44.0 2.74e-01 94.1% 32.6%
4276145 220.1.1.126 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.54 42.0 3.72e-01 88.2% 94.5%
3936037 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.88e-01 85.3% 98.9%
4600292 10.1.1.35 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.54 47.0 3.30e-01 95.6% 57.6%
3597540 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.53 44.0 2.84e-01 94.1% 40.6%
4337890 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.53 45.0 3.25e-01 98.5% 59.0%
3704287 4357.1.1.0 beta barrels › WWE domain › WWE domain › WWE domain 0.53 41.0 4.18e-01 86.8% 86.2%
3949359 5.1.4.87 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD 0.52 41.0 2.58e-01 86.8% 46.1%
3521864 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 45.0 3.15e-01 95.6% 56.8%
3684031 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.52 43.0 2.95e-01 94.1% 30.9%
3916473 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 43.0 3.88e-01 95.6% 67.0%
2983288 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 37.0 3.43e-01 88.2% 58.4%
3236407 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.51 40.0 3.57e-01 82.4% 68.4%
5022543 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.51 43.0 2.60e-01 100.0% 12.7%
4942828 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.51 45.0 3.43e-01 100.0% 88.4%
3519316 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.51 43.0 3.31e-01 98.5% 59.4%