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MZ605292.1__QYW06426.1__uan_014__00014

Bact-Vir

MZ605292.1__QYW06426.1__uan_014__00014

Identity

Accession:
MZ605292 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_UAntarctica

TaxID: 2856996

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-78
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bcfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.64 48.0 3.28e-01 80.8% 76.2%
4rmmA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 48.0 3.83e-01 80.8% 51.1%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.61 43.0 4.22e-01 79.5% 67.5%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.61 46.0 3.80e-01 80.8% 57.1%
3nhqC03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.60 46.0 3.72e-01 83.6% 44.8%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.59 45.0 3.58e-01 82.2% 66.7%
4ehoB03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.58 43.0 3.31e-01 79.5% 49.2%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 42.0 3.92e-01 80.8% 63.7%
3ckjA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 45.0 3.03e-01 90.4% 70.0%
4q0jA03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.56 45.0 3.67e-01 90.4% 50.0%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 41.0 3.31e-01 78.1% 88.7%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 40.0 3.80e-01 79.5% 83.5%
4o01D01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.55 44.0 3.25e-01 89.0% 42.5%
4bwiB01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 45.0 3.36e-01 91.8% 56.2%
6g20A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 44.0 3.30e-01 94.5% 77.4%
4gw9A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 43.0 3.14e-01 91.8% 54.0%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 40.0 2.92e-01 83.6% 80.3%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 40.0 3.23e-01 82.2% 88.0%
5dynA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 3.49e-01 84.9% 73.6%
6baoA03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.51 42.0 3.32e-01 94.5% 43.7%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 39.0 2.88e-01 84.9% 85.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3938063 223.2.1.9 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.69 55.0 4.44e-01 86.3% 50.7%
4024044 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.67 52.0 4.59e-01 83.6% 61.1%
3186351 2008.1.1.144 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27653 0.66 53.0 4.35e-01 89.0% 65.7%
3696887 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.64 56.0 3.86e-01 100.0% 30.4%
5049089 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 49.0 4.19e-01 83.6% 52.5%
4928701 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 50.0 4.44e-01 86.3% 67.6%
3715965 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.63 48.0 3.86e-01 83.6% 42.0%
4947650 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 48.0 4.20e-01 84.9% 53.9%
5049357 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 46.0 4.07e-01 84.9% 54.5%
3518491 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.59 35.0 2.88e-01 71.2% 35.2%
396038 4221.1.1.2 ↗ a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › PHA01746 0.56 42.0 3.92e-01 80.8% 63.7%
5027436 873.1.1.1 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.55 41.0 3.35e-01 83.6% 95.3%
3709808 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 39.0 3.58e-01 76.7% 66.3%
3690534 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.54 40.0 3.24e-01 80.8% 85.5%
4945021 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 39.0 3.43e-01 78.1% 68.2%
4027851 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.53 42.0 3.39e-01 87.7% 92.4%
2982157 223.1.1.1 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PHY 0.52 40.0 3.12e-01 89.0% 49.2%
5082399 316.1.1.18 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.52 41.0 3.04e-01 84.9% 86.1%
4984579 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.51 42.0 2.70e-01 100.0% 55.7%