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MZ605292.1__QYW06428.1__uan_016__00016

Bact-Vir

MZ605292.1__QYW06428.1__uan_016__00016

Identity

Accession:
MZ605292 ↗
Kingdom:
phage

Quality

90.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-64
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 53.0 5.54e-01 75.4% 90.4%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 52.0 4.89e-01 73.7% 66.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 50.0 5.37e-01 71.9% 93.8%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.73 52.0 5.45e-01 75.4% 92.0%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.35e-01 71.9% 93.6%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 4.65e-01 80.7% 70.4%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 47.0 3.58e-01 75.4% 36.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.66 45.0 4.35e-01 71.9% 72.7%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 47.0 4.44e-01 78.9% 90.0%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.43e-01 84.2% 73.8%
4gnxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 48.0 3.97e-01 82.5% 82.4%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.43e-01 78.9% 89.2%
3nppA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.63 47.0 4.18e-01 84.2% 88.5%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 41.0 3.87e-01 71.9% 98.6%
1m9sA03 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.60 40.0 3.76e-01 71.9% 89.3%
3gasA01 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.58 39.0 3.56e-01 70.2% 88.6%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 40.0 3.25e-01 75.4% 96.7%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 40.0 3.20e-01 77.2% 95.4%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 40.0 3.03e-01 78.9% 44.0%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 40.0 3.33e-01 78.9% 77.4%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 40.0 3.31e-01 75.4% 96.2%
4a9wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 39.0 2.53e-01 78.9% 77.9%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 38.0 3.19e-01 75.4% 96.5%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 38.0 3.15e-01 75.4% 94.0%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 40.0 2.86e-01 86.0% 55.7%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 39.0 2.91e-01 78.9% 44.0%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 41.0 3.54e-01 89.5% 89.2%
1xdiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 37.0 3.06e-01 75.4% 95.8%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 39.0 2.75e-01 84.2% 63.3%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 37.0 3.07e-01 75.4% 95.8%
1hyuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 39.0 2.89e-01 84.2% 62.1%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 39.0 2.87e-01 84.2% 62.0%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 37.0 2.79e-01 80.7% 62.0%
4m8aA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.53 39.0 3.75e-01 82.5% 88.1%
4z32A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.28e-01 77.2% 72.9%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 36.0 2.75e-01 75.4% 77.1%
6rjiA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 33.0 3.48e-01 70.2% 71.2%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.52 34.0 3.54e-01 70.2% 74.5%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 39.0 2.57e-01 86.0% 47.5%
1xdnA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.52 37.0 2.75e-01 75.4% 93.5%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 35.0 3.53e-01 70.2% 74.1%
5jciA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 37.0 2.61e-01 78.9% 58.3%
3ng7X01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 37.0 2.64e-01 84.2% 64.3%
1a2fA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.51 42.0 3.39e-01 96.5% 90.1%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 35.0 3.60e-01 78.9% 92.9%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 35.0 2.39e-01 75.4% 48.2%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.50 33.0 3.42e-01 70.2% 74.5%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3037102 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 54.0 5.31e-01 73.7% 74.2%
4084190 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.77 51.0 5.13e-01 70.2% 72.9%
3938589 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.76 52.0 5.49e-01 71.9% 90.0%
4191690 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.75 51.0 5.15e-01 71.9% 74.1%
3443078 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.74 53.0 3.70e-01 75.4% 26.3%
3299797 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.74 52.0 5.20e-01 75.4% 76.7%
3649741 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 54.0 4.96e-01 78.9% 66.7%
1145920 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 53.0 4.72e-01 77.2% 57.8%
3404936 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 50.0 5.28e-01 71.9% 90.0%
3656232 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.74 49.0 5.39e-01 71.9% 88.9%
4321173 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.74 52.0 5.22e-01 75.4% 77.6%
3476178 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 53.0 4.17e-01 78.9% 45.0%
3486495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 49.0 3.42e-01 70.2% 28.0%
3817476 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 51.0 5.36e-01 75.4% 92.0%
3546607 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 50.0 5.24e-01 73.7% 90.0%
3575066 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 48.0 4.81e-01 71.9% 98.3%
3326980 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 54.0 5.37e-01 84.2% 83.3%
4833642 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 49.0 5.27e-01 73.7% 100.0%
3584224 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 60.0 5.00e-01 100.0% 54.3%
3662384 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.17e-01 77.2% 94.0%
3577864 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 50.0 4.45e-01 78.9% 58.8%
5036616 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 49.0 4.58e-01 75.4% 67.1%
3993968 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.68 52.0 3.94e-01 86.0% 47.6%
3592077 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 48.0 3.54e-01 75.4% 75.9%
3300848 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.67 43.0 3.59e-01 70.2% 36.9%
3363360 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.64 54.0 4.84e-01 100.0% 77.6%
4147290 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.62 46.0 4.50e-01 82.5% 72.3%
3638174 4.1.1.320 beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.62 55.0 4.65e-01 100.0% 93.7%
3562817 220.1.1.120 beta barrels › PH domain-like › PH domain-like › PH domain-like › GARIL_Rab2_bd 0.57 44.0 3.38e-01 91.2% 96.9%
4018596 4.1.1.320 beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.57 51.0 4.22e-01 100.0% 90.0%
4932492 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.57 37.0 3.69e-01 70.2% 63.3%
4222673 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.56 39.0 2.40e-01 78.9% 33.9%
4019093 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.56 45.0 3.19e-01 100.0% 86.8%
3028534 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.56 39.0 2.95e-01 78.9% 88.4%
4108859 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.55 39.0 3.12e-01 77.2% 93.1%
4031001 2003.1.3.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_3 0.55 38.0 2.42e-01 77.2% 33.6%
4927970 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.55 38.0 3.05e-01 75.4% 79.7%
4999741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 40.0 3.70e-01 84.2% 67.5%
3486642 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.53 39.0 2.78e-01 84.2% 60.9%
4015630 3257.1.1.0 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.53 43.0 3.07e-01 100.0% 93.9%
3742752 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.52 42.0 3.06e-01 100.0% 90.7%
3672678 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.52 38.0 3.42e-01 80.7% 85.9%
3476961 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.51 42.0 3.04e-01 100.0% 87.2%
3426781 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.51 34.0 2.54e-01 73.7% 22.2%
3627144 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.51 39.0 2.85e-01 91.2% 55.8%
4440203 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.50 33.0 3.29e-01 73.7% 63.3%
3416606 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.50 40.0 2.96e-01 100.0% 89.2%
D2 medium residues 70-115
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3sfvB01 3.30.450.390 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.73 57.0 3.98e-01 84.8% 92.3%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 56.0 4.22e-01 84.8% 96.3%
4ijaA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 54.0 3.77e-01 84.8% 64.0%
2v0uA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 55.0 3.91e-01 91.3% 90.4%
7whgG02 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.68 59.0 4.74e-01 100.0% 67.4%
1xjcA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 43.0 3.01e-01 80.4% 20.1%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 49.0 3.80e-01 78.3% 55.7%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 49.0 3.68e-01 78.3% 63.2%
1pqzA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.66 54.0 3.88e-01 91.3% 46.0%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.66 46.0 3.72e-01 76.1% 56.1%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.66 50.0 3.23e-01 80.4% 34.7%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.66 53.0 4.37e-01 87.0% 90.1%
1i24A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 55.0 3.56e-01 100.0% 41.5%
1jb7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 54.0 3.66e-01 97.8% 86.8%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 56.0 4.14e-01 100.0% 80.2%
1s7iA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.63 46.0 3.39e-01 78.3% 33.1%
7oode01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.63 52.0 4.61e-01 100.0% 63.2%
5exeA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.63 44.0 2.76e-01 73.9% 39.6%
2fuqA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.63 54.0 3.28e-01 100.0% 20.0%
1eljA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 47.0 3.09e-01 80.4% 68.9%
3qthB00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.63 47.0 3.25e-01 82.6% 59.1%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 49.0 3.09e-01 91.3% 57.0%
1xm7A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.62 50.0 3.41e-01 97.8% 34.9%
1lc0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.61 51.0 3.52e-01 91.3% 59.9%
1hfvA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 53.0 3.68e-01 100.0% 56.7%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 52.0 4.23e-01 100.0% 75.0%
5xwkA02 3.30.1360.150 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.61 48.0 3.55e-01 100.0% 32.5%
4i9fA03 3.30.300.290 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.60 44.0 3.79e-01 95.7% 48.1%
3oqgA00 3.40.1440.50 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › 0.60 49.0 3.44e-01 100.0% 35.8%
1o5wB02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.60 44.0 3.03e-01 80.4% 64.9%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 49.0 3.79e-01 93.5% 91.7%
1vx7X00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 43.0 3.43e-01 78.3% 61.9%
1b8pA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.59 51.0 3.49e-01 100.0% 91.3%
1z90B01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.59 46.0 2.79e-01 91.3% 15.9%
2czrA02 3.90.79.30 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain 0.58 40.0 3.00e-01 71.7% 68.3%
1g8mA02 3.40.140.20 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain 0.58 43.0 3.00e-01 84.8% 49.4%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 49.0 3.21e-01 100.0% 95.5%
5cygB00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.58 44.0 2.77e-01 93.5% 13.9%
3p26A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 48.0 3.18e-01 100.0% 60.4%
2vvlG01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 45.0 2.87e-01 91.3% 35.9%
3euoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.57 41.0 2.86e-01 78.3% 30.6%
3tqfA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 3.47e-01 100.0% 30.9%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.57 47.0 3.36e-01 95.7% 67.5%
3i6dA02 3.90.660.20 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › Protoporphyrinogen oxidase, mitochondrial; domain 2 0.57 40.0 2.73e-01 78.3% 62.5%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 45.0 3.44e-01 100.0% 38.1%
4uyiA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.56 42.0 3.09e-01 82.6% 74.0%
7tn8A01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 39.0 2.61e-01 73.9% 81.6%
1a9xA06 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.55 48.0 3.19e-01 100.0% 30.5%
1qmgB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 41.0 2.69e-01 82.6% 18.5%
2o3iA01 3.40.1610.10 Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain 0.54 38.0 2.57e-01 82.6% 26.3%
5iheB01 3.60.21.50 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.53 45.0 2.78e-01 97.8% 42.6%
3sftA00 3.40.50.180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylesterase CheB, C-terminal domain 0.53 42.0 2.86e-01 91.3% 22.2%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 39.0 3.47e-01 91.3% 55.0%
2memA00 3.90.1150.190 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › SLED domain 0.53 41.0 3.10e-01 87.0% 37.8%
2yx1A02 3.30.300.110 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Met-10+ protein-like domains 0.52 42.0 3.64e-01 93.5% 55.8%
2jugA01 1.10.10.1830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain 0.52 39.0 3.71e-01 84.8% 96.4%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 37.0 2.66e-01 89.1% 29.9%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 40.0 3.79e-01 87.0% 96.4%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022955 3559.1.1.50 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › PF28561 0.79 56.0 3.79e-01 76.1% 63.6%
3174842 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.78 55.0 4.38e-01 73.9% 80.0%
4939058 3457.1.1.3 alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II 0.74 47.0 2.88e-01 100.0% 12.0%
4027178 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 3.82e-01 71.7% 99.0%
3482328 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.73 59.0 4.45e-01 87.0% 87.6%
3667031 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.73 51.0 4.30e-01 73.9% 72.0%
60305 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.72 56.0 4.26e-01 84.8% 99.1%
3406351 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.72 58.0 4.31e-01 87.0% 58.2%
4017372 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.72 58.0 4.25e-01 87.0% 55.7%
3579472 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.72 57.0 4.07e-01 87.0% 49.2%
3907844 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.72 55.0 3.61e-01 84.8% 47.4%
137366 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.71 43.0 2.89e-01 78.3% 16.6%
5062471 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 57.0 4.24e-01 87.0% 59.1%
3935332 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 57.0 4.04e-01 87.0% 48.5%
3228583 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 56.0 4.15e-01 87.0% 55.7%
3593339 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 56.0 4.15e-01 87.0% 55.7%
5061619 1075.1.1.3 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 0.70 60.0 3.72e-01 100.0% 37.5%
3808578 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.70 56.0 4.72e-01 87.0% 85.1%
4937431 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.70 55.0 3.74e-01 87.0% 75.2%
1759624 3282.1.1.1 a+b complex topology › LidA › LidA › LidA › LidA_Long_CC 0.69 55.0 3.09e-01 87.0% 8.5%
4002410 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.68 49.0 3.49e-01 80.4% 43.3%
3890723 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.67 59.0 3.65e-01 97.8% 21.2%
3262883 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.67 51.0 3.43e-01 80.4% 80.6%
4967063 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.67 59.0 3.70e-01 97.8% 28.5%
3197800 221.13.1.2 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain › RRG1_C 0.67 59.0 4.04e-01 100.0% 78.2%
3387583 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.67 45.0 3.08e-01 80.4% 20.0%
3649913 5050.1.1.58 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C 0.66 51.0 3.42e-01 84.8% 22.4%
3946113 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.66 49.0 3.66e-01 78.3% 75.2%
4098687 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 48.0 3.40e-01 80.4% 64.5%
3587620 304.55.1.22 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › MobL 0.65 50.0 3.20e-01 82.6% 18.6%
4027686 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.64 54.0 5.12e-01 93.5% 78.2%
3550136 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 46.0 3.39e-01 76.1% 57.4%
5051446 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 48.0 3.44e-01 82.6% 75.0%
4378012 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.64 53.0 4.08e-01 93.5% 61.0%
414327 620.1.1.4 alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DUF1993 0.63 47.0 3.25e-01 82.6% 59.1%
3995931 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 50.0 2.96e-01 93.5% 16.5%
4183868 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.62 55.0 4.62e-01 100.0% 78.5%
5011218 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.62 45.0 3.71e-01 78.3% 67.1%
3967506 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.62 46.0 2.98e-01 84.8% 57.9%
3586391 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.62 52.0 3.18e-01 97.8% 70.0%
4142311 109.4.1.1297 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 0.62 55.0 3.08e-01 100.0% 20.9%
3367891 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.61 53.0 3.20e-01 100.0% 99.4%
3423625 109.4.1.1371 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif 0.61 49.0 2.81e-01 93.5% 19.8%
3463429 109.4.1.1335 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.61 51.0 2.89e-01 93.5% 15.5%
4027687 330.3.1.0 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.61 51.0 4.78e-01 93.5% 76.4%
3680994 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.61 48.0 2.91e-01 91.3% 21.5%
3325708 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.60 51.0 3.15e-01 97.8% 82.3%
5054104 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.59 48.0 3.10e-01 89.1% 30.9%
3327326 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.59 49.0 2.73e-01 93.5% 7.4%
3461434 3957.1.1.0 a+b two layers › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 0.59 50.0 5.13e-01 97.8% 95.6%
3712081 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 47.0 3.61e-01 89.1% 87.3%
5000660 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.58 43.0 2.91e-01 84.8% 75.8%
3309917 109.4.1.2594 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, PPR_long, E_motif 0.57 50.0 2.84e-01 100.0% 14.2%
3962316 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.57 48.0 3.69e-01 100.0% 83.3%
5013701 3572.1.1.2 a+b complex topology › Cascade subunit Csa5 › Cascade subunit Csa5 › Cascade subunit Csa5 › Cas_Csa5 0.56 48.0 3.56e-01 91.3% 40.0%
5028345 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.56 42.0 2.81e-01 84.8% 31.7%
4102441 7520.1.1.1 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.56 48.0 3.37e-01 100.0% 54.2%
4457759 327.16.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N 0.56 43.0 3.53e-01 87.0% 85.6%
3786964 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.55 45.0 3.03e-01 91.3% 81.6%
3615679 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.55 46.0 3.11e-01 100.0% 97.9%
4955849 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.54 41.0 2.76e-01 89.1% 55.6%
3708820 7581.1.1.22 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt 0.54 41.0 2.45e-01 80.4% 12.7%
3629354 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.52 45.0 3.36e-01 100.0% 47.2%
3989505 6051.5.1.0 alpha duplicates or obligate multimers › Docking domains in modular polyketide synthases › Class 3 N-terminal docking domain › Class 3 N-terminal docking domain 0.52 36.0 3.65e-01 95.7% 77.8%
3165390 304.24.1.36 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SPOR 0.52 45.0 3.77e-01 97.8% 90.0%
4958616 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.52 43.0 3.72e-01 97.8% 85.3%
3268538 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.51 40.0 3.10e-01 93.5% 53.9%