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MZ605292.1__QYW06510.1__uan_098__00098
Bact-VirMZ605292.1__QYW06510.1__uan_098__00098
Identity
- Accession:
- MZ605292 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-235
Domain cluster:
rep: MN234206.1__QFG12290.1__PBI_RACECAR_277__00246__D97-238
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5of3A00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.74 | 58.0 | 4.62e-01 | 79.9% | 57.4% |
| 1g71A01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.74 | 54.0 | 4.82e-01 | 79.9% | 55.1% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.74 | 46.0 | 4.59e-01 | 89.1% | 60.8% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.73 | 61.0 | 4.66e-01 | 87.4% | 75.6% |
| 2iruA02 | 3.30.70.3300 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 56.0 | 6.23e-01 | 78.7% | 99.3% |
| 2faoA01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.73 | 66.0 | 5.52e-01 | 96.0% | 61.7% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 33.0 | 4.71e-01 | 84.5% | 100.0% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.66 | 40.0 | 4.55e-01 | 86.2% | 78.6% |
| 2qyxB01 | 3.30.70.1360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like | 0.66 | 31.0 | 3.84e-01 | 83.9% | 69.7% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.63 | 37.0 | 4.65e-01 | 70.1% | 97.1% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 34.0 | 4.42e-01 | 84.5% | 92.9% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 35.0 | 4.57e-01 | 86.2% | 100.0% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 34.0 | 4.39e-01 | 84.5% | 94.9% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 34.0 | 4.36e-01 | 84.5% | 97.9% |
| 2d9oA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 32.0 | 4.10e-01 | 99.4% | 92.0% |
| 3h7hB00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.58 | 33.0 | 4.20e-01 | 79.9% | 98.9% |
| 1wvfA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.58 | 44.0 | 4.06e-01 | 80.5% | 85.7% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 34.0 | 4.25e-01 | 83.9% | 99.0% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 34.0 | 4.10e-01 | 81.6% | 90.2% |
| 4x0qA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 33.0 | 3.57e-01 | 100.0% | 67.1% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 31.0 | 4.03e-01 | 84.5% | 99.0% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.55 | 29.0 | 3.79e-01 | 98.3% | 92.6% |
| 5yjlB01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.55 | 41.0 | 4.25e-01 | 85.6% | 83.9% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.54 | 44.0 | 4.01e-01 | 86.8% | 91.7% |
| 4pvkA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.54 | 38.0 | 3.85e-01 | 87.4% | 71.2% |
| 4kgmA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.54 | 43.0 | 3.99e-01 | 85.6% | 90.0% |
| 1zr6A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.54 | 41.0 | 3.93e-01 | 87.9% | 68.0% |
| 1pbuA00 | 3.30.70.1010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain | 0.54 | 37.0 | 3.89e-01 | 83.3% | 76.5% |
| 1f3vA00 | 3.30.70.680 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TRADD, N-terminal domain | 0.52 | 37.0 | 3.88e-01 | 73.0% | 92.4% |
| 3rjaA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.51 | 43.0 | 3.90e-01 | 89.1% | 69.0% |
| 2uvaG12 | 3.30.70.3330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 31.0 | 3.54e-01 | 98.3% | 81.2% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.51 | 36.0 | 3.76e-01 | 83.3% | 78.0% |
| 5l6gA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.50 | 41.0 | 3.78e-01 | 87.4% | 69.4% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081312 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.93 | 82.0 | 7.44e-01 | 97.1% | 71.8% |
| 4212379 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.82 | 64.0 | 5.50e-01 | 79.9% | 63.5% |
| 3603386 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.81 | 63.0 | 5.15e-01 | 79.9% | 69.8% |
| 5027616 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.80 | 60.0 | 5.14e-01 | 79.9% | 51.5% |
| 4973338 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 62.0 | 5.11e-01 | 79.9% | 66.7% |
| 5019731 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 62.0 | 4.91e-01 | 79.9% | 71.9% |
| 5060983 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 62.0 | 5.10e-01 | 79.9% | 64.6% |
| 4978273 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 61.0 | 5.21e-01 | 79.9% | 66.4% |
| 4552974 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 62.0 | 5.42e-01 | 79.9% | 65.0% |
| 4994656 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 61.0 | 5.24e-01 | 79.9% | 63.8% |
| 4085259 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.78 | 61.0 | 5.19e-01 | 79.9% | 67.9% |
| 5069642 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.78 | 59.0 | 5.39e-01 | 79.9% | 60.9% |
| 4942021 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.78 | 74.0 | 6.22e-01 | 100.0% | 67.6% |
| 5051647 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.78 | 60.0 | 5.34e-01 | 79.9% | 61.3% |
| 5045979 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.78 | 60.0 | 5.10e-01 | 79.9% | 52.2% |
| 4940975 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.78 | 63.0 | 5.16e-01 | 83.9% | 59.0% |
| 5044094 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.78 | 60.0 | 5.41e-01 | 79.9% | 60.9% |
| 4442634 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 60.0 | 4.96e-01 | 79.9% | 70.3% |
| 4956744 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 60.0 | 5.20e-01 | 79.9% | 67.1% |
| 4425840 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 60.0 | 4.80e-01 | 79.9% | 72.5% |
| 4426711 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 60.0 | 5.14e-01 | 79.9% | 54.1% |
| 4955551 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.77 | 69.0 | 6.04e-01 | 96.0% | 66.9% |
| 4946939 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 60.0 | 5.69e-01 | 79.9% | 69.5% |
| 4989296 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.77 | 62.0 | 5.12e-01 | 83.9% | 61.7% |
| 4984518 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.76 | 70.0 | 5.97e-01 | 97.1% | 63.3% |
| 4983703 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.76 | 71.0 | 6.07e-01 | 98.9% | 65.3% |
| 4274062 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.76 | 59.0 | 5.15e-01 | 79.9% | 57.2% |
| 5004945 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.76 | 58.0 | 5.02e-01 | 79.9% | 53.7% |
| 5026687 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.75 | 71.0 | 6.00e-01 | 100.0% | 64.0% |
| 3518002 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.75 | 62.0 | 4.98e-01 | 86.8% | 66.7% |
| 3959043 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.74 | 70.0 | 5.59e-01 | 100.0% | 60.9% |
| 5066297 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.74 | 68.0 | 5.79e-01 | 97.7% | 70.2% |
| 4998612 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.74 | 57.0 | 5.07e-01 | 79.3% | 58.3% |
| 4650634 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.74 | 58.0 | 5.02e-01 | 79.9% | 55.6% |
| 3591528 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.74 | 62.0 | 5.21e-01 | 87.9% | 69.1% |
| 2711606 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.74 | 70.0 | 5.54e-01 | 100.0% | 58.6% |
| 5065288 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.74 | 57.0 | 4.82e-01 | 79.9% | 53.8% |
| 3692641 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.73 | 62.0 | 5.18e-01 | 87.9% | 63.6% |
| 4997193 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.73 | 57.0 | 4.97e-01 | 79.9% | 62.8% |
| None | — | 0.73 | 67.0 | 5.47e-01 | 98.3% | 56.5% | |
| 4940473 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.63 | 33.0 | 4.39e-01 | 83.3% | 95.6% |
| 4467337 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.62 | 43.0 | 4.72e-01 | 85.1% | 86.4% |
| 3802060 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.62 | 57.0 | 5.01e-01 | 99.4% | 72.5% |
| 4587782 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.60 | 42.0 | 4.54e-01 | 85.1% | 84.8% |
| 3955607 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.60 | 34.0 | 4.39e-01 | 83.9% | 97.0% |
| 3701221 | 304.43.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 | 0.60 | 36.0 | 4.37e-01 | 79.9% | 96.2% |
| 4024206 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 36.0 | 4.35e-01 | 80.5% | 93.6% |
| 4613556 | 304.28.1.13 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › MMPL | 0.58 | 36.0 | 4.05e-01 | 100.0% | 77.8% |
| 4249547 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.56 | 37.0 | 4.08e-01 | 85.1% | 81.4% |
| 3345706 | 3122.1.1.0 ↗ | a+b complex topology › MESD › MESD › MESD | 0.56 | 30.0 | 3.52e-01 | 98.9% | 72.0% |
| 4429288 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.56 | 36.0 | 4.00e-01 | 86.2% | 83.0% |
| 4163603 | 304.55.2.7 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f | 0.55 | 42.0 | 3.85e-01 | 79.3% | 99.1% |
| 4151784 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.54 | 45.0 | 3.87e-01 | 87.4% | 58.5% |
| 3640423 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.54 | 44.0 | 3.86e-01 | 85.6% | 92.7% |
| 4133039 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.54 | 42.0 | 4.32e-01 | 83.9% | 85.5% |
| 3356626 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.53 | 39.0 | 4.06e-01 | 77.0% | 81.9% |
| 4491515 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.53 | 43.0 | 3.76e-01 | 86.8% | 57.4% |
| 3826050 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.53 | 43.0 | 3.69e-01 | 85.6% | 90.9% |
| 4018685 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.53 | 43.0 | 3.67e-01 | 87.4% | 55.0% |
| 4613363 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.53 | 43.0 | 3.76e-01 | 87.9% | 57.4% |
| 3700856 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 30.0 | 3.69e-01 | 96.0% | 94.0% |
| 4017883 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.52 | 42.0 | 3.68e-01 | 88.5% | 57.9% |
| 2721342 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.51 | 41.0 | 3.61e-01 | 85.6% | 59.1% |
| 3192994 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.51 | 40.0 | 3.31e-01 | 81.0% | 85.8% |
| 4014867 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.51 | 42.0 | 3.74e-01 | 88.5% | 66.0% |
| 1887045 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.50 | 41.0 | 3.57e-01 | 87.4% | 59.6% |
D2
high
residues 240-370
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.63 | 49.0 | 5.15e-01 | 82.4% | 94.9% |
| 6hwjA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.60 | 42.0 | 3.47e-01 | 72.5% | 92.1% |
| 4iluA02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.58 | 38.0 | 4.03e-01 | 71.0% | 76.6% |
| 5d1rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 40.0 | 3.41e-01 | 71.0% | 80.1% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.55 | 39.0 | 3.82e-01 | 72.5% | 78.6% |
| 3hhwK01 | 1.10.3570.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like fold › Rhabdovirus nucleocapsid protein like domain | 0.52 | 37.0 | 3.32e-01 | 72.5% | 78.7% |
| 2jekA00 | 1.25.40.380 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein of unknown function DUF1810 | 0.52 | 36.0 | 3.57e-01 | 71.0% | 95.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973692 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.78 | 56.0 | 6.37e-01 | 74.8% | 100.0% |
| 3215628 | 206.1.1.44 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 | 0.67 | 47.0 | 3.41e-01 | 72.5% | 53.7% |
| 3715769 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.66 | 46.0 | 3.76e-01 | 72.5% | 67.5% |
| 3413505 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.62 | 48.0 | 5.13e-01 | 82.4% | 99.1% |
| 3243563 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 42.0 | 3.80e-01 | 71.0% | 96.1% |
| 3416246 | 206.1.1.55 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL | 0.55 | 47.0 | 3.30e-01 | 93.9% | 80.5% |
| 3604094 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.52 | 36.0 | 3.35e-01 | 71.0% | 90.9% |
| 3977638 | 7516.1.1.102 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2, Glyco_trans_2_3 | 0.50 | 37.0 | 2.86e-01 | 77.1% | 76.7% |
D3
high
residues 849-949
Domain cluster:
rep: MZ447863.1__QXN68050.1__X__00014__D586-694
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 5.19e-01 | 100.0% | 78.1% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 49.0 | 4.86e-01 | 100.0% | 69.8% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 49.0 | 4.88e-01 | 100.0% | 71.8% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.44e-01 | 100.0% | 57.5% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 46.0 | 4.43e-01 | 100.0% | 61.6% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 4.84e-01 | 100.0% | 68.4% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 5.19e-01 | 100.0% | 85.4% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 4.76e-01 | 100.0% | 70.5% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 45.0 | 4.05e-01 | 100.0% | 49.6% |
| 2bv6A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 3.92e-01 | 100.0% | 49.3% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 4.57e-01 | 100.0% | 75.3% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 41.0 | 4.81e-01 | 92.1% | 92.9% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 50.0 | 5.13e-01 | 100.0% | 86.7% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 44.0 | 4.54e-01 | 100.0% | 75.3% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 5.03e-01 | 100.0% | 89.0% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 49.0 | 4.67e-01 | 100.0% | 70.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 46.0 | 4.44e-01 | 100.0% | 67.8% |
| 2kpmA01 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.63 | 45.0 | 4.97e-01 | 97.0% | 100.0% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 47.0 | 4.67e-01 | 100.0% | 76.2% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 4.40e-01 | 100.0% | 72.8% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 42.0 | 4.53e-01 | 99.0% | 86.6% |
| 2vs7A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 42.0 | 4.63e-01 | 100.0% | 92.3% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 4.87e-01 | 100.0% | 93.3% |
| 4g6qA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 4.32e-01 | 100.0% | 79.3% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 4.69e-01 | 100.0% | 82.5% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.73e-01 | 100.0% | 81.1% |
| 2dgxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 29.0 | 3.18e-01 | 97.0% | 55.0% |
| 2gj2A00 | 3.30.70.2070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain | 0.58 | 31.0 | 3.46e-01 | 95.0% | 64.6% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.58 | 42.0 | 4.57e-01 | 96.0% | 97.5% |
| 2ph7A01 | 1.10.3400.10 | Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like | 0.58 | 41.0 | 3.90e-01 | 95.0% | 61.3% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 4.44e-01 | 100.0% | 96.2% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 31.0 | 3.60e-01 | 88.1% | 74.3% |
| 1ka8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 44.0 | 4.46e-01 | 92.1% | 85.0% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 32.0 | 3.67e-01 | 81.2% | 82.9% |
| 2bj3D02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.54 | 32.0 | 3.57e-01 | 86.1% | 72.8% |
| 3iu0A00 | 3.90.1360.10 | Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase | 0.54 | 40.0 | 2.80e-01 | 79.2% | 88.4% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 39.0 | 3.43e-01 | 78.2% | 85.5% |
| 4lhfA00 | 6.10.200.10 | Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox | 0.53 | 32.0 | 3.49e-01 | 88.1% | 73.4% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 38.0 | 3.28e-01 | 75.2% | 99.4% |
| 6ruiK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.51 | 37.0 | 3.77e-01 | 85.1% | 76.7% |
| 6gmhK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.50 | 35.0 | 3.39e-01 | 83.2% | 62.6% |
| 1i6uA01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 33.0 | 3.81e-01 | 79.2% | 100.0% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031662 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 51.0 | 4.78e-01 | 100.0% | 58.4% |
| 4959713 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 50.0 | 4.88e-01 | 100.0% | 65.7% |
| 4959599 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.72 | 52.0 | 5.05e-01 | 100.0% | 67.5% |
| 3944710 | 101.1.2.85 ↗ | alpha arrays › HTH › HTH › winged helix domain › TraI_2_C | 0.72 | 64.0 | 6.06e-01 | 98.0% | 89.2% |
| 4978412 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 52.0 | 4.39e-01 | 100.0% | 45.1% |
| 4934055 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 50.0 | 5.51e-01 | 100.0% | 92.5% |
| 4979997 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 50.0 | 4.51e-01 | 100.0% | 53.6% |
| 5035522 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.70 | 50.0 | 4.95e-01 | 100.0% | 70.5% |
| 5065027 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.70 | 51.0 | 4.50e-01 | 100.0% | 52.4% |
| 4999286 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.70 | 51.0 | 4.19e-01 | 100.0% | 42.8% |
| 5051534 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 50.0 | 4.13e-01 | 100.0% | 41.6% |
| 5035685 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 50.0 | 4.71e-01 | 100.0% | 62.1% |
| 4995581 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 49.0 | 4.99e-01 | 100.0% | 76.0% |
| 5029778 | 101.1.2.43 ↗ | alpha arrays › HTH › HTH › winged helix domain › Pox_D5 | 0.68 | 50.0 | 5.28e-01 | 94.1% | 86.7% |
| 4978090 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 49.0 | 3.87e-01 | 100.0% | 35.8% |
| 3601870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 48.0 | 5.15e-01 | 95.0% | 88.2% |
| 5046461 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.67 | 49.0 | 3.97e-01 | 100.0% | 39.5% |
| 5013990 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 48.0 | 4.58e-01 | 100.0% | 64.2% |
| 5072200 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.66 | 46.0 | 4.61e-01 | 100.0% | 69.5% |
| 4955909 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.66 | 52.0 | 5.13e-01 | 98.0% | 78.2% |
| 3688358 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.66 | 47.0 | 5.15e-01 | 94.1% | 93.8% |
| 5001098 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 47.0 | 4.90e-01 | 100.0% | 83.3% |
| 4109840 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 51.0 | 5.16e-01 | 100.0% | 86.0% |
| 3280466 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.65 | 48.0 | 3.94e-01 | 100.0% | 42.1% |
| 4373647 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 51.0 | 4.83e-01 | 100.0% | 71.7% |
| 4933997 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 51.0 | 4.81e-01 | 100.0% | 71.7% |
| 5011183 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 53.0 | 5.21e-01 | 100.0% | 83.6% |
| 5000349 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 50.0 | 4.79e-01 | 100.0% | 71.7% |
| 3927517 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 51.0 | 5.12e-01 | 100.0% | 86.0% |
| 3426878 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.64 | 49.0 | 4.92e-01 | 100.0% | 82.0% |
| 4284507 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 52.0 | 5.16e-01 | 100.0% | 85.7% |
| 4983039 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 51.0 | 5.15e-01 | 100.0% | 88.9% |
| 4975513 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 52.0 | 5.06e-01 | 100.0% | 81.8% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 47.0 | 4.71e-01 | 100.0% | 76.2% |
| 4943364 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 52.0 | 4.89e-01 | 100.0% | 74.0% |
| 3875839 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 50.0 | 4.85e-01 | 100.0% | 75.7% |
| 4974161 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 51.0 | 4.78e-01 | 100.0% | 71.8% |
| 5055466 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 54.0 | 5.23e-01 | 100.0% | 84.3% |
| 5036311 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 50.0 | 5.07e-01 | 100.0% | 87.0% |
| 5003874 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 50.0 | 4.79e-01 | 98.0% | 73.3% |
| 5025840 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 5.02e-01 | 100.0% | 87.0% |
| 4928669 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 50.0 | 4.96e-01 | 100.0% | 82.9% |
| 5029327 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.62 | 53.0 | 5.01e-01 | 99.0% | 79.2% |
| 2036621 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.62 | 44.0 | 4.40e-01 | 100.0% | 72.8% |
| 5073929 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.62 | 49.0 | 4.77e-01 | 100.0% | 78.2% |
| None | — | 0.62 | 49.0 | 4.98e-01 | 100.0% | 87.0% | |
| 4982781 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.62 | 50.0 | 4.89e-01 | 100.0% | 81.8% |
| 4503351 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.62 | 47.0 | 4.71e-01 | 100.0% | 80.0% |
| 4956520 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.61 | 49.0 | 4.86e-01 | 100.0% | 80.9% |
| 5026783 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.61 | 49.0 | 4.93e-01 | 100.0% | 87.0% |
| 5049515 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.61 | 50.0 | 4.87e-01 | 100.0% | 80.0% |
| 5065786 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.61 | 49.0 | 4.65e-01 | 100.0% | 73.3% |
| 5054914 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 44.0 | 4.28e-01 | 100.0% | 69.1% |
| 5076520 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 44.0 | 4.51e-01 | 100.0% | 79.0% |
| 4979490 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 48.0 | 4.60e-01 | 100.0% | 73.3% |
| 3628572 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.59 | 49.0 | 4.65e-01 | 100.0% | 75.2% |
| 5026582 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 39.0 | 4.00e-01 | 96.0% | 73.7% |
| 3233084 | 101.1.2.186 ↗ | alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH | 0.57 | 50.0 | 5.11e-01 | 100.0% | 100.0% |
| 3940545 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.56 | 49.0 | 4.49e-01 | 100.0% | 84.3% |
| 4957834 | 101.1.2.920 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C | 0.54 | 45.0 | 4.32e-01 | 93.1% | 95.8% |
| 3616787 | 206.1.2.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK | 0.54 | 45.0 | 3.29e-01 | 92.1% | 82.2% |
| 4957324 | 101.1.2.920 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C | 0.53 | 45.0 | 4.27e-01 | 94.1% | 93.6% |
| 3579884 | 206.1.1.190 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, IPK | 0.53 | 44.0 | 2.75e-01 | 92.1% | 38.0% |
| 5057576 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.52 | 31.0 | 3.40e-01 | 71.3% | 71.8% |
| 3177266 | 109.4.1.2344 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30023, PF30024 | 0.51 | 40.0 | 2.95e-01 | 85.1% | 38.6% |
D4
medium
residues 1-61
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1va0B02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.68 | 52.0 | 4.12e-01 | 83.6% | 40.3% |
| 1cbfA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.66 | 45.0 | 3.58e-01 | 70.5% | 38.8% |
| 1pjqB05 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.61 | 45.0 | 3.60e-01 | 80.3% | 38.9% |
| 2qjvA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 40.0 | 3.00e-01 | 100.0% | 27.3% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.59 | 47.0 | 3.74e-01 | 93.4% | 46.8% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.57 | 45.0 | 3.47e-01 | 88.5% | 44.8% |
| 3ndcA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.55 | 40.0 | 3.31e-01 | 95.1% | 39.8% |
| 3lb6C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.79e-01 | 100.0% | 61.4% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.53 | 37.0 | 3.56e-01 | 100.0% | 62.5% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.51 | 39.0 | 3.26e-01 | 96.7% | 47.7% |
| 1zvfB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 2.61e-01 | 73.8% | 39.0% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 41.0 | 3.27e-01 | 100.0% | 42.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1937525 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.68 | 52.0 | 4.10e-01 | 83.6% | 40.0% |
| 5032586 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.63 | 40.0 | 2.62e-01 | 100.0% | 14.8% |
| 4928746 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.62 | 47.0 | 3.28e-01 | 82.0% | 35.5% |
| 4487969 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.61 | 45.0 | 3.62e-01 | 80.3% | 39.8% |
| 3784271 | 376.1.1.14 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › UPF1_Zn_bind | 0.60 | 42.0 | 3.65e-01 | 73.8% | 49.5% |
| 4958689 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.58 | 40.0 | 4.08e-01 | 75.4% | 90.0% |
| 4986747 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.57 | 42.0 | 3.06e-01 | 82.0% | 34.9% |
| 3504586 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.57 | 45.0 | 3.50e-01 | 93.4% | 41.9% |
| 3662726 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.56 | 37.0 | 3.13e-01 | 98.4% | 37.4% |
| 4489065 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.56 | 40.0 | 3.31e-01 | 80.3% | 41.6% |
| 3516762 | 10.12.1.52 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 | 0.55 | 42.0 | 2.80e-01 | 100.0% | 19.6% |
| 4928621 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.55 | 43.0 | 3.50e-01 | 95.1% | 48.6% |
| 5034902 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.55 | 47.0 | 3.57e-01 | 96.7% | 47.6% |
| 5031010 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 45.0 | 4.34e-01 | 95.1% | 90.0% |
| 3837973 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.53 | 36.0 | 2.98e-01 | 100.0% | 35.2% |
| 3672250 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.53 | 36.0 | 2.69e-01 | 100.0% | 23.7% |
| 5049794 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.52 | 42.0 | 3.33e-01 | 96.7% | 48.3% |
| 3651974 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.52 | 39.0 | 2.83e-01 | 85.2% | 73.3% |
| 4138490 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.50 | 34.0 | 2.87e-01 | 98.4% | 37.4% |
D5
medium
residues 371-497
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r9iA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 29.0 | 3.27e-01 | 89.8% | 56.0% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 28.0 | 3.07e-01 | 89.8% | 61.0% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.52 | 19.0 | 2.53e-01 | 89.8% | 57.4% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.52 | 28.0 | 3.30e-01 | 74.8% | 74.2% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.51 | 27.0 | 3.37e-01 | 83.5% | 84.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1560725 | 3974.1.1.1 ↗ | beta duplicates or obligate multimers › EBNA-2 N-terminal dimerization (END) domain › EBNA-2 N-terminal dimerization (END) domain › EBNA-2 N-terminal dimerization (END) domain › EBNA2_N | 0.59 | 22.0 | 2.94e-01 | 74.8% | 61.3% |
| 3636403 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.52 | 31.0 | 3.09e-01 | 92.1% | 54.6% |
| 4934603 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 32.0 | 3.72e-01 | 71.7% | 89.4% |
D6
medium
residues 498-550
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 44.0 | 3.29e-01 | 77.4% | 78.7% |
| 2eobA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 38.0 | 3.08e-01 | 73.6% | 66.4% |
| 2zo4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 44.0 | 2.96e-01 | 100.0% | 68.7% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 46.0 | 3.07e-01 | 100.0% | 60.4% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.53 | 35.0 | 2.29e-01 | 71.7% | 86.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3233063 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 45.0 | 3.62e-01 | 77.4% | 41.8% |
| 4932907 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.51 | 38.0 | 2.51e-01 | 86.8% | 67.4% |
| 4358227 | 2003.1.5.138 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020+Methyltrans_SAM | 0.50 | 35.0 | 2.05e-01 | 98.1% | 7.3% |
D7
medium
residues 551-601_754-838
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zttA00 | 6.10.140.720 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 34.0 | 4.60e-01 | 77.2% | 86.3% |
| 4hl4A01 | 1.10.8.1310 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 37.0 | 3.63e-01 | 86.0% | 55.5% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.59 | 32.0 | 3.34e-01 | 97.8% | 54.3% |
| 3n00A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 43.0 | 3.91e-01 | 83.8% | 81.5% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 31.0 | 3.90e-01 | 77.2% | 95.1% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.53 | 37.0 | 3.23e-01 | 70.6% | 58.5% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.53 | 37.0 | 4.20e-01 | 94.9% | 95.1% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.53 | 38.0 | 3.90e-01 | 93.4% | 78.0% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 37.0 | 4.15e-01 | 97.1% | 94.2% |
| 2nq2A00 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.53 | 41.0 | 3.14e-01 | 81.6% | 85.4% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.52 | 41.0 | 4.07e-01 | 84.6% | 84.4% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.52 | 36.0 | 3.44e-01 | 96.3% | 61.9% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.51 | 37.0 | 3.99e-01 | 94.9% | 86.6% |
| 3ljbA00 | 1.20.120.1240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain | 0.50 | 39.0 | 3.34e-01 | 80.9% | 90.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3732060 | 3924.1.1.1 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 | 0.63 | 43.0 | 3.89e-01 | 89.7% | 52.2% |
| 3293516 | 4953.1.1.23 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › YIF1 | 0.59 | 48.0 | 4.28e-01 | 89.7% | 78.5% |
| 3994623 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 41.0 | 4.46e-01 | 79.4% | 90.0% |
| 4960584 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.58 | 45.0 | 3.97e-01 | 83.8% | 63.9% |
| 4683248 | 5086.1.1.66 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › GNVR | 0.55 | 40.0 | 3.96e-01 | 100.0% | 72.1% |
| 3576964 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.55 | 39.0 | 4.28e-01 | 89.0% | 87.8% |
| 3589322 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.54 | 39.0 | 3.06e-01 | 74.3% | 90.2% |
| 3193797 | 109.24.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 | 0.52 | 35.0 | 3.72e-01 | 97.1% | 76.7% |
| 5060191 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.52 | 41.0 | 3.61e-01 | 85.3% | 70.5% |
| 4162366 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 36.0 | 2.52e-01 | 70.6% | 35.2% |
| 3739367 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.51 | 33.0 | 3.38e-01 | 93.4% | 65.2% |
D8
medium
residues 602-753
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vkgA17 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 55.0 | 6.06e-01 | 86.2% | 87.9% |
| 3vkgA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 62.0 | 6.33e-01 | 88.2% | 88.6% |
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 53.0 | 5.41e-01 | 86.2% | 75.3% |
| 1iqpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 56.0 | 5.46e-01 | 89.5% | 73.2% |
| 3bosB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 55.0 | 5.43e-01 | 88.8% | 74.7% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 60.0 | 5.52e-01 | 88.8% | 80.4% |
| 3vkgA07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 63.0 | 4.60e-01 | 96.1% | 42.4% |
| 1cr2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 61.0 | 5.17e-01 | 98.0% | 83.3% |
| 4nh0B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 61.0 | 4.77e-01 | 100.0% | 75.1% |
| 2r44A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 59.0 | 5.73e-01 | 96.7% | 89.2% |
| 6eudA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 49.0 | 4.74e-01 | 85.5% | 90.6% |
| 2i3bA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 53.0 | 4.91e-01 | 95.4% | 93.7% |
| 3dmnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 48.0 | 4.76e-01 | 85.5% | 85.7% |
| 3mwyW03 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.58 | 50.0 | 4.13e-01 | 92.1% | 73.9% |
| 3upuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 49.0 | 4.71e-01 | 90.8% | 86.9% |
| 1rz3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 47.0 | 4.35e-01 | 88.2% | 71.6% |
| 1sq5C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 50.0 | 3.93e-01 | 94.1% | 73.5% |
| 1uejB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 50.0 | 4.49e-01 | 97.4% | 93.2% |
| 1odfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 47.0 | 3.84e-01 | 93.4% | 87.5% |
| 3vbcA00 | 3.40.50.11530 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 39.0 | 4.14e-01 | 85.5% | 83.8% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.54 | 42.0 | 4.33e-01 | 94.1% | 87.3% |
| 1gg1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 3.75e-01 | 98.7% | 87.0% |
| 5hc8A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.54 | 43.0 | 3.71e-01 | 84.9% | 98.3% |
| 6hqvA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 48.0 | 4.63e-01 | 97.4% | 96.4% |
| 2ov8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 4.58e-01 | 100.0% | 87.6% |
| 3lv8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 48.0 | 4.30e-01 | 97.4% | 92.6% |
| 2r48A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 31.0 | 3.59e-01 | 93.4% | 82.9% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.52 | 46.0 | 4.51e-01 | 96.1% | 92.0% |
| 3zdrA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 3.95e-01 | 89.5% | 94.8% |
| 4nl4H03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.89e-01 | 90.8% | 83.2% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4931926 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 72.0 | 5.57e-01 | 100.0% | 45.4% |
| 4926850 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.80 | 62.0 | 6.17e-01 | 90.8% | 78.1% |
| 3388291 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 55.0 | 6.07e-01 | 88.2% | 85.6% |
| 3952423 | 2004.1.1.339 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3631 | 0.78 | 71.0 | 5.82e-01 | 100.0% | 55.8% |
| 5064031 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 69.0 | 5.23e-01 | 100.0% | 43.4% |
| 1447881 | 2004.1.1.93 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy | 0.77 | 56.0 | 6.13e-01 | 88.2% | 89.6% |
| None | — | 0.77 | 63.0 | 5.96e-01 | 90.1% | 72.2% | |
| None | — | 0.77 | 62.0 | 5.98e-01 | 88.2% | 75.3% | |
| 4998586 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 64.0 | 5.71e-01 | 100.0% | 64.3% |
| 5013281 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 71.0 | 5.70e-01 | 100.0% | 53.3% |
| None | — | 0.76 | 60.0 | 5.83e-01 | 86.2% | 74.1% | |
| None | — | 0.76 | 60.0 | 5.82e-01 | 86.2% | 74.1% | |
| 4134156 | 2004.1.1.125 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N | 0.76 | 61.0 | 6.00e-01 | 86.8% | 79.4% |
| None | — | 0.75 | 61.0 | 5.59e-01 | 86.8% | 66.8% | |
| None | — | 0.75 | 60.0 | 5.94e-01 | 86.8% | 79.4% | |
| 4308308 | 2004.1.1.771 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_lid_NAV1 | 0.74 | 66.0 | 4.99e-01 | 94.7% | 48.7% |
| 3781473 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.74 | 62.0 | 4.18e-01 | 87.5% | 28.5% |
| 3702069 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.74 | 66.0 | 5.79e-01 | 94.1% | 75.1% |
| 4218663 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 62.0 | 5.57e-01 | 88.8% | 75.6% |
| 4935745 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.73 | 61.0 | 5.70e-01 | 87.5% | 84.9% |
| 4507179 | 1.1.9.48 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › AAA | 0.73 | 61.0 | 3.96e-01 | 87.5% | 24.7% |
| 3717212 | 2004.1.1.93 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy | 0.73 | 57.0 | 5.94e-01 | 90.8% | 87.1% |
| 4002451 | 2004.1.1.93 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy | 0.72 | 64.0 | 5.98e-01 | 99.3% | 77.3% |
| None | — | 0.72 | 60.0 | 5.40e-01 | 96.1% | 65.5% | |
| None | — | 0.72 | 60.0 | 4.91e-01 | 87.5% | 76.6% | |
| 5081314 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 61.0 | 5.10e-01 | 100.0% | 53.5% |
| None | — | 0.71 | 61.0 | 4.15e-01 | 89.5% | 29.4% | |
| 3957998 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.71 | 65.0 | 5.79e-01 | 96.7% | 83.9% |
| None | — | 0.71 | 60.0 | 4.88e-01 | 90.1% | 65.7% | |
| 3290153 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.71 | 66.0 | 6.05e-01 | 99.3% | 81.1% |
| 5003620 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.70 | 61.0 | 4.70e-01 | 100.0% | 42.4% |
| 4443044 | 2004.1.1.1014 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 | 0.70 | 66.0 | 5.12e-01 | 100.0% | 51.0% |
| 5010380 | 2004.1.1.1014 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 | 0.70 | 64.0 | 5.01e-01 | 100.0% | 48.8% |
| 4936471 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.70 | 57.0 | 5.19e-01 | 96.1% | 65.5% |
| 3995568 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.70 | 58.0 | 4.64e-01 | 87.5% | 73.4% |
| 3700673 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 59.0 | 5.66e-01 | 88.8% | 81.8% |
| 3357405 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 60.0 | 5.48e-01 | 90.1% | 82.1% |
| 4959355 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 64.0 | 5.29e-01 | 98.7% | 71.0% |
| 3839744 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 63.0 | 5.17e-01 | 100.0% | 68.7% |
| 3878864 | 2004.1.1.180 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_6 | 0.67 | 61.0 | 5.37e-01 | 96.7% | 76.3% |
| 4379372 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.67 | 60.0 | 4.54e-01 | 94.7% | 76.8% |
| 3675905 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.67 | 58.0 | 5.35e-01 | 90.1% | 75.7% |
| 4017436 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.66 | 54.0 | 4.61e-01 | 86.2% | 55.4% |
| 3181663 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.66 | 55.0 | 5.11e-01 | 88.2% | 88.4% |
| 3165248 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.65 | 57.0 | 5.15e-01 | 94.1% | 73.2% |
| 3610966 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 59.0 | 4.83e-01 | 100.0% | 68.6% |
| 3731584 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.63 | 54.0 | 4.60e-01 | 90.8% | 71.1% |
| 3717697 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 57.0 | 5.18e-01 | 98.7% | 83.5% |
| 3351179 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.59 | 53.0 | 4.32e-01 | 96.1% | 55.3% |
| 1954209 | 2004.1.1.44 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK | 0.57 | 54.0 | 4.18e-01 | 100.0% | 88.9% |
| 3486480 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 51.0 | 4.52e-01 | 97.4% | 93.8% |
| 3514468 | 2003.1.7.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › LUD_dom | 0.55 | 41.0 | 3.72e-01 | 75.7% | 85.9% |
| 4178346 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 46.0 | 3.93e-01 | 97.4% | 91.0% |