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MZ605293.1__QYW06553.1__uav_021__00021

Bact-Vir

MZ605293.1__QYW06553.1__uav_021__00021

Identity

Accession:
MZ605293 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Uavernvirus› Pseudomonas_phage_UAVern

TaxID: 2856997

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-44
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3egrA00 3.10.20.520 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B 0.73 63.0 5.61e-01 100.0% 77.8%
1mg7A01 3.30.70.1000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like 0.73 62.0 4.17e-01 100.0% 75.4%
4gvbB00 3.30.70.440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Killer toxin KP6 alpha-subunit 0.72 59.0 5.09e-01 100.0% 86.5%
5xbfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.65 53.0 4.35e-01 95.3% 97.7%
2aehA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.65 52.0 4.18e-01 95.3% 93.8%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 54.0 4.54e-01 100.0% 91.4%
2edyA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 47.0 3.72e-01 100.0% 35.9%
8os3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 53.0 4.18e-01 100.0% 44.6%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.63 54.0 4.39e-01 100.0% 84.5%
5ejrA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 53.0 4.31e-01 97.7% 95.3%
5t0oA03 3.30.70.1320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like 0.63 44.0 3.49e-01 79.1% 54.5%
3mqzA00 3.30.930.20 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 0.62 46.0 3.07e-01 86.0% 62.4%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.61 50.0 4.21e-01 100.0% 64.6%
1y6kR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 49.0 3.88e-01 100.0% 42.2%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 3.73e-01 100.0% 40.8%
3r7wC02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.60 44.0 3.45e-01 83.7% 33.6%
2mv2A00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.59 45.0 3.18e-01 86.0% 53.4%
2vugA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.59 44.0 3.92e-01 100.0% 54.2%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.58 46.0 4.17e-01 100.0% 62.1%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.58 44.0 4.31e-01 100.0% 81.6%
1t4aA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.58 44.0 3.89e-01 100.0% 97.5%
1hxmB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 3.69e-01 100.0% 45.7%
4me3A03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.56 46.0 4.39e-01 100.0% 83.6%
2zu0D00 6.10.330.10 Special › Helix non-globular › Monooxygenase › 0.56 35.0 3.63e-01 93.0% 66.7%
2qyxA02 3.30.70.1360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like 0.54 42.0 3.36e-01 100.0% 39.8%
7ui8A01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 3.34e-01 100.0% 52.9%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 41.0 3.04e-01 100.0% 32.4%
4tpuA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.52 38.0 3.99e-01 100.0% 97.3%
2ox5B00 2.60.40.2470 Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain 0.52 41.0 3.25e-01 100.0% 40.0%
2wadA02 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.52 39.0 2.89e-01 100.0% 27.0%
5adxA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 36.0 2.63e-01 86.0% 78.4%
2kdxA00 3.30.2320.80 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › 0.50 39.0 2.98e-01 93.0% 47.9%
7esdB01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 40.0 3.33e-01 100.0% 48.9%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.50 39.0 3.28e-01 100.0% 58.1%
1yk9A00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.50 37.0 2.68e-01 100.0% 54.9%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4964337 3115.5.1.1 ↗ a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB 0.72 61.0 5.73e-01 100.0% 85.5%
5050551 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.71 59.0 4.15e-01 100.0% 94.7%
3628286 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.71 51.0 3.63e-01 83.7% 25.4%
4364088 3115.4.1.0 ↗ a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 0.69 58.0 5.74e-01 97.7% 100.0%
3911204 382.1.1.16 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › CD59 0.69 54.0 4.65e-01 100.0% 53.3%
3408914 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.68 49.0 3.54e-01 83.7% 25.4%
5080205 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.68 57.0 5.48e-01 100.0% 90.0%
3422239 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.67 50.0 3.19e-01 86.0% 25.7%
3400717 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.66 53.0 4.46e-01 100.0% 98.8%
3645411 223.1.1.79 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_NLP 0.66 56.0 3.57e-01 100.0% 44.5%
4995774 375.1.1.185 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 0.65 50.0 5.12e-01 97.7% 95.0%
3388528 7056.1.1.0 ↗ few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan 0.64 49.0 5.08e-01 100.0% 92.5%
3739712 223.2.1.10 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.64 48.0 3.47e-01 86.0% 30.0%
4969863 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.63 52.0 4.49e-01 100.0% 64.0%
4338821 221.1.1.69 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SNX17-27-31_F1_FERM 0.63 50.0 3.97e-01 97.7% 78.1%
3277720 375.1.1.185 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 0.63 47.0 4.81e-01 100.0% 95.0%
3620456 221.1.1.64 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N 0.62 46.0 3.69e-01 95.3% 94.5%
3472406 5.1.12.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains 0.60 48.0 2.97e-01 100.0% 70.7%
4029023 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.59 49.0 3.82e-01 100.0% 46.7%
3600775 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 43.0 4.36e-01 100.0% 88.9%
3439118 109.4.1.1285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.57 47.0 2.65e-01 100.0% 14.7%
4971396 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 45.0 4.27e-01 100.0% 78.2%
3958896 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.56 47.0 4.31e-01 100.0% 71.7%
4948014 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 44.0 4.34e-01 100.0% 86.0%
3482147 224.1.1.1 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.55 47.0 3.27e-01 97.7% 73.6%
4993851 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 45.0 4.55e-01 100.0% 95.6%
3705148 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 46.0 4.56e-01 100.0% 95.6%
4666101 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 39.0 3.94e-01 100.0% 77.8%
4943977 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 42.0 4.34e-01 100.0% 100.0%
3827821 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 40.0 3.53e-01 97.7% 89.4%
3734753 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.54 40.0 2.38e-01 86.0% 90.4%
3338287 221.1.1.166 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 0.54 39.0 3.60e-01 100.0% 56.9%
3599827 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.07e-01 100.0% 34.0%
3221742 3662.1.1.0 ↗ a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related 0.53 37.0 3.02e-01 86.0% 60.0%
3778103 386.1.1.281 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27082 0.53 36.0 3.37e-01 86.0% 52.3%
3494105 221.1.1.64 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N 0.52 39.0 3.37e-01 100.0% 48.8%
4015853 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 40.0 2.80e-01 100.0% 29.2%
3295746 101.1.2.454 ↗ alpha arrays › HTH › HTH › winged helix domain › FAM91_N 0.51 43.0 3.68e-01 100.0% 84.0%
3628729 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 41.0 2.23e-01 93.0% 11.1%
3397821 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 35.0 2.35e-01 76.7% 27.4%
4985088 301.9.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA 0.50 42.0 3.12e-01 100.0% 48.8%