Back to structures

MZ612111.1__UEP19870.1__X__00028

Bact-Vir

MZ612111.1__UEP19870.1__X__00028

Identity

Accession:
MZ612111 ↗
Kingdom:
phage

Quality

66.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-77
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tuuA00 1.20.140.80 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP 0.72 61.0 4.56e-01 93.3% 71.5%
1xjkA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.67 58.0 3.30e-01 95.0% 29.5%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 54.0 4.32e-01 88.3% 85.3%
7sk7A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.64 53.0 3.43e-01 90.0% 24.1%
6za2B01 3.40.50.10390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 0.62 37.0 2.75e-01 88.3% 21.9%
1ni4A00 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.59 53.0 3.26e-01 100.0% 71.5%
6v9qH01 3.30.70.2540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 0.56 43.0 3.36e-01 85.0% 48.1%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 45.0 4.64e-01 91.7% 98.3%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.45e-01 100.0% 56.0%
1dkqA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.54 36.0 3.00e-01 71.7% 89.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4283560 3346.1.1.5 a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › ODR4-like 0.72 65.0 4.43e-01 100.0% 31.0%
3573657 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.71 36.0 4.20e-01 86.7% 70.0%
3406351 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.69 53.0 4.24e-01 81.7% 75.5%
3489196 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.67 61.0 4.05e-01 100.0% 71.7%
3935332 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 54.0 4.06e-01 88.3% 71.5%
3574196 864.1.1.1 a+b two layers › DLC › DLC › DLC › Dynein_light 0.63 40.0 4.03e-01 76.7% 63.3%
3662481 2492.1.1.11 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NPL4 0.59 42.0 3.32e-01 95.0% 33.1%
3932471 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 50.0 3.12e-01 100.0% 73.8%
4930854 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.53 34.0 3.71e-01 91.7% 100.0%
3804361 207.1.1.60 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 0.51 37.0 2.33e-01 78.3% 23.2%
3700970 323.1.1.20 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding,ACAS_N 0.51 42.0 2.74e-01 91.7% 55.3%
3591437 601.29.1.0 alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like 0.50 35.0 3.02e-01 73.3% 53.0%