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MZ622177.1__QZD98828.1__SEA_PINKCOFFEE_81__00081
Bact-VirMZ622177.1__QZD98828.1__SEA_PINKCOFFEE_81__00081
Identity
- Accession:
- MZ622177 ↗
- Kingdom:
- phage
Quality
84.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stackebrandtviridae›
Wizardvirus›
Gordonia_phage_PinkCoffee
TaxID: 2871517
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-112
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 45.0 | 5.38e-01 | 97.1% | 84.7% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 33.0 | 3.30e-01 | 99.0% | 60.7% |
| 2hfqA00 | 3.10.510.10 | Alpha Beta › Roll › NE1680-like fold › NE1680-like | 0.52 | 29.0 | 3.16e-01 | 98.1% | 65.9% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 31.0 | 2.98e-01 | 92.3% | 49.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3650798 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 4.54e-01 | 100.0% | 68.7% |
| 4295399 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.62 | 46.0 | 4.71e-01 | 99.0% | 80.0% |
| 4278171 | 375.1.1.41 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Methyltransf_13 | 0.62 | 36.0 | 4.38e-01 | 84.6% | 96.7% |
| 4938633 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 35.0 | 3.21e-01 | 86.5% | 42.2% |
| 5036729 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.59 | 38.0 | 3.63e-01 | 97.1% | 55.0% |
| 4989873 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.54 | 44.0 | 4.26e-01 | 100.0% | 76.7% |
| 3255737 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.52 | 39.0 | 3.73e-01 | 98.1% | 67.5% |
| 3422852 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.52 | 48.0 | 4.49e-01 | 100.0% | 96.8% |
| 3253473 | 825.1.1.5 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › BB_PF | 0.51 | 40.0 | 3.22e-01 | 85.6% | 68.6% |
| 5078764 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 43.0 | 4.12e-01 | 93.3% | 88.3% |
| 4943928 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.50 | 43.0 | 4.00e-01 | 98.1% | 74.6% |