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QYW08105.1

Arc-Vir

MZ666939__QYW08105.1__15570-00008__00008

Identity

Accession:
MZ666939 ↗
Protein ID:
QYW08105.1 ↗
Kingdom:
archaea

Quality

87.5 mean pLDDT

Taxonomy

TaxID: 2866665

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-60
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.70 61.0 4.26e-01 100.0% 74.5%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.70 47.0 3.93e-01 70.7% 98.0%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.68 57.0 5.08e-01 98.3% 98.9%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.68 40.0 3.19e-01 86.2% 29.1%
4qiwB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.67 57.0 4.24e-01 100.0% 81.6%
8f5pC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 50.0 3.19e-01 81.0% 24.6%
7ylsB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.67 49.0 3.97e-01 77.6% 88.9%
3vcaA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.66 54.0 4.27e-01 89.7% 84.0%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 54.0 3.35e-01 89.7% 37.7%
1w1wA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 53.0 3.46e-01 100.0% 19.3%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.65 46.0 3.76e-01 75.9% 89.0%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 3.90e-01 96.6% 56.1%
3vz9B00 3.30.457.50 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 0.64 51.0 4.30e-01 89.7% 68.0%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 54.0 4.02e-01 98.3% 38.6%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.63 53.0 4.12e-01 100.0% 93.6%
3wmyA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 55.0 3.45e-01 98.3% 62.6%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 49.0 3.03e-01 87.9% 15.3%
4i99A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 53.0 3.34e-01 100.0% 18.6%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 54.0 3.82e-01 98.3% 59.9%
3ktaA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 3.86e-01 100.0% 36.0%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 49.0 3.25e-01 98.3% 37.8%
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 48.0 3.19e-01 96.6% 20.5%
4u3qB00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.59 51.0 4.34e-01 100.0% 83.8%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 48.0 3.20e-01 98.3% 94.7%
5h66A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 49.0 3.53e-01 98.3% 34.2%
6qj2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 3.06e-01 98.3% 19.7%
4kg0A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.58 49.0 3.71e-01 98.3% 72.5%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 50.0 3.18e-01 100.0% 41.2%
2oqhA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 49.0 4.04e-01 98.3% 92.1%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 41.0 3.73e-01 75.9% 67.9%
3dueA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.58 46.0 3.57e-01 86.2% 55.9%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 42.0 4.20e-01 82.8% 77.0%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 47.0 3.10e-01 100.0% 53.6%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 49.0 3.09e-01 98.3% 87.0%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 46.0 3.68e-01 96.6% 94.4%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 4.11e-01 82.8% 93.5%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 47.0 3.61e-01 100.0% 68.8%
3cawA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 44.0 3.93e-01 98.3% 94.5%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 44.0 3.61e-01 96.6% 97.3%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.64e-01 96.6% 64.9%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 39.0 3.69e-01 84.5% 84.7%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 39.0 2.60e-01 93.1% 35.8%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 39.0 3.67e-01 84.5% 84.5%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230224 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.76 60.0 4.27e-01 86.2% 43.5%
3749834 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.71 50.0 5.18e-01 91.4% 78.2%
5061951 66.1.1.4 beta sandwiches › ISP domain › ISP domain › ISP domain › FtrD-like 0.71 57.0 4.51e-01 87.9% 83.9%
3661102 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.71 44.0 4.56e-01 87.9% 67.3%
4410540 3321.1.1.1 a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander 0.70 39.0 3.44e-01 86.2% 36.5%
None 0.68 53.0 3.28e-01 98.3% 14.1%
4946073 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.68 59.0 4.23e-01 100.0% 76.6%
5047074 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.67 54.0 3.35e-01 100.0% 14.3%
4485211 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.67 52.0 3.20e-01 98.3% 13.5%
4932690 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.67 58.0 4.36e-01 100.0% 82.0%
4199352 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.66 51.0 3.14e-01 100.0% 13.9%
3452325 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 57.0 3.89e-01 98.3% 33.0%
3516397 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.65 56.0 3.98e-01 100.0% 36.2%
3830390 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.64 50.0 3.14e-01 84.5% 23.2%
3412171 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.64 52.0 3.06e-01 100.0% 10.1%
4028291 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.63 50.0 3.07e-01 100.0% 12.8%
3517323 3131.1.1.2 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN 0.63 56.0 4.55e-01 100.0% 68.2%
3294867 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.63 52.0 4.54e-01 96.6% 94.7%
4954892 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.62 52.0 3.26e-01 98.3% 63.9%
3193556 2004.1.1.481 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 0.62 52.0 2.92e-01 98.3% 7.7%
4018889 2004.1.1.481 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 0.62 52.0 3.12e-01 98.3% 13.3%
4929550 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.61 46.0 4.40e-01 82.8% 88.6%
4420266 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.61 45.0 3.44e-01 79.3% 65.9%
4014812 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.61 48.0 4.78e-01 84.5% 83.3%
3734392 2004.1.1.480 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.61 51.0 3.05e-01 98.3% 11.9%
4254206 12.3.1.22 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.61 49.0 3.23e-01 91.4% 98.5%
4979664 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 52.0 3.28e-01 100.0% 17.9%
4983459 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.61 51.0 3.12e-01 98.3% 14.2%
3961859 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.61 53.0 3.25e-01 100.0% 20.3%
3705072 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.61 51.0 4.23e-01 100.0% 91.3%
3167364 2004.1.1.481 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 0.60 51.0 3.09e-01 98.3% 13.8%
4595400 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.60 52.0 3.19e-01 100.0% 19.2%
4009284 2004.1.1.478 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_21 0.60 52.0 3.22e-01 100.0% 65.9%
3878636 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.60 51.0 3.88e-01 96.6% 57.9%
4976068 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 50.0 3.00e-01 98.3% 13.1%
1900833 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.60 48.0 3.76e-01 96.6% 40.0%
4214866 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.59 50.0 3.13e-01 100.0% 65.3%
4158802 6.1.1.36 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › RNaseT2L_C 0.58 48.0 3.94e-01 96.6% 100.0%
4244965 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.58 49.0 3.08e-01 100.0% 64.9%
3679992 5.1.4.31 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.58 50.0 2.79e-01 100.0% 14.7%
3212890 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.57 50.0 3.28e-01 100.0% 29.5%
4213053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 44.0 3.74e-01 84.5% 67.4%
4034031 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.56 47.0 4.56e-01 91.4% 96.9%
5054507 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 47.0 4.35e-01 94.8% 84.0%
4948353 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.55 47.0 3.10e-01 98.3% 73.1%
2116605 206.1.1.7 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase 0.55 44.0 2.81e-01 91.4% 31.3%
3812322 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.85e-01 100.0% 65.0%
4982659 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.53 47.0 2.90e-01 100.0% 69.1%
4981192 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 46.0 3.02e-01 100.0% 63.1%
3622645 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.53 40.0 3.53e-01 100.0% 52.6%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 40.0 3.92e-01 84.5% 84.6%
4888987 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.51 41.0 3.91e-01 87.9% 79.7%
3388088 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.51 40.0 3.15e-01 87.9% 50.0%
2675820 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.50 39.0 3.43e-01 86.2% 60.4%