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MZ675741.1__UFJ83240.1__X__00025

Bact-Vir

MZ675741.1__UFJ83240.1__X__00025

Identity

Accession:
MZ675741 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vieuvirus› Acinetobacter_phage_Ab1656-2

TaxID: 2897426

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-160
PDB
Domain cluster: rep: IMGVR_UViG_3300035202_000868-3300035202-Ga0373640_0012220_4967_6241__D136-245
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07715.21 best Plug 48.7 1.30e-12 80.0% 90.6%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rdrA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.88 75.0 7.72e-01 89.2% 96.0%
3fhhA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.85 70.0 7.16e-01 85.4% 96.0%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.84 73.0 4.52e-01 93.1% 18.6%
2hdiA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.81 66.0 6.76e-01 85.4% 96.9%
3m8bA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.81 65.0 6.73e-01 84.6% 97.6%
3cslA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.80 69.0 7.02e-01 90.8% 97.7%
1xkwA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.80 59.0 6.69e-01 81.5% 100.0%
8p97A01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.79 68.0 4.30e-01 93.1% 19.5%
3v8xA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.78 67.0 6.72e-01 90.8% 99.2%
1xkhA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.78 60.0 6.62e-01 81.5% 100.0%
1kmoA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.78 67.0 6.75e-01 90.8% 99.2%
4b7oA01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.75 59.0 6.39e-01 83.1% 99.1%
5fokB01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.74 61.0 6.24e-01 93.1% 91.1%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.74 69.0 4.33e-01 100.0% 21.0%
5exvC00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.54 40.0 3.74e-01 89.2% 61.8%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968792 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.90 74.0 7.42e-01 84.6% 89.2%
5082117 3070.2.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.89 74.0 7.72e-01 85.4% 98.3%
3164779 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.88 72.0 7.69e-01 84.6% 100.0%
4074927 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.87 72.0 7.24e-01 85.4% 87.7%
4169677 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.86 68.0 6.93e-01 80.8% 88.0%
3973015 3070.2.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.85 66.0 6.89e-01 80.0% 90.8%
1760520 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.85 70.0 7.20e-01 86.2% 96.0%
3969554 3070.2.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.84 69.0 7.07e-01 85.4% 100.0%
3969693 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.84 68.0 6.98e-01 84.6% 98.4%
3163597 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.83 66.0 6.33e-01 82.3% 85.5%
1717340 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.83 67.0 6.95e-01 83.8% 99.2%
3981818 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.82 68.0 7.10e-01 86.2% 95.8%
3967025 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.82 68.0 6.73e-01 86.2% 88.9%
2755876 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.82 68.0 6.95e-01 86.2% 91.2%
3967068 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.81 69.0 6.66e-01 90.0% 95.9%
3966135 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.81 68.0 6.30e-01 88.5% 82.5%
3387447 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.80 70.0 6.95e-01 91.5% 97.0%
3387256 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.80 66.0 6.66e-01 86.2% 94.6%
4870098 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.80 64.0 6.76e-01 83.1% 99.1%
1760706 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.80 67.0 6.41e-01 88.5% 82.6%
3838104 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.80 65.0 6.80e-01 86.2% 95.0%
4116018 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.79 69.0 6.74e-01 91.5% 90.0%
1716635 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.79 66.0 6.51e-01 88.5% 95.7%
3943624 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.78 64.0 6.45e-01 85.4% 100.0%
3964130 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.78 63.0 6.14e-01 83.8% 86.4%
3838161 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.78 64.0 6.14e-01 85.4% 92.4%
4005508 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.78 62.0 6.29e-01 83.8% 100.0%
3967391 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.77 63.0 6.45e-01 84.6% 96.0%
3963508 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.77 61.0 6.24e-01 82.3% 92.0%
4055156 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.77 64.0 6.42e-01 86.9% 88.5%
3386389 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.77 63.0 6.15e-01 85.4% 89.3%
4104239 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.77 65.0 6.43e-01 88.5% 97.0%
3100975 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.76 64.0 6.74e-01 88.5% 97.5%
1716668 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.76 64.0 6.30e-01 88.5% 88.3%
3967961 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.76 64.0 6.56e-01 88.5% 93.6%
3967363 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.76 64.0 6.37e-01 88.5% 85.2%
4307952 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.76 62.0 6.30e-01 86.2% 92.3%
3060580 3070.2.1.1 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.75 61.0 6.41e-01 84.6% 99.1%
4020715 221.1.1.52 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.51 32.0 3.42e-01 74.6% 72.7%
3409881 219.1.1.81 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY-3_4_CD 0.51 38.0 2.91e-01 80.8% 61.5%
D2 medium residues 161-199_301-345
PDB
Domain cluster: rep: CAKLQF020000002.1__CAH1073169.1__SAMEA5780031_00402__00039__D611-682
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.89 82.0 4.72e-01 100.0% 12.8%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.85 79.0 4.75e-01 100.0% 21.4%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.84 73.0 4.50e-01 100.0% 18.3%
1by5A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.83 78.0 4.60e-01 100.0% 26.9%
8p97A01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.82 77.0 4.50e-01 100.0% 22.6%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.82 77.0 4.46e-01 100.0% 19.1%
4frxA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.79 70.0 4.36e-01 94.0% 23.6%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.75 70.0 4.49e-01 100.0% 41.4%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.70 50.0 4.22e-01 86.9% 45.9%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 42.0 3.82e-01 89.3% 45.9%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 64.0 4.29e-01 100.0% 28.9%
5nj5A01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.69 58.0 4.15e-01 90.5% 71.6%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.68 49.0 4.31e-01 96.4% 51.2%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.68 49.0 4.35e-01 88.1% 52.5%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.67 59.0 4.22e-01 97.6% 37.3%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.67 55.0 4.10e-01 90.5% 36.1%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.66 56.0 4.01e-01 94.0% 44.8%
3qtdA01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.65 56.0 4.06e-01 92.9% 89.5%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.65 38.0 4.34e-01 81.0% 80.0%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.63 56.0 3.84e-01 100.0% 40.9%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.63 56.0 4.20e-01 100.0% 62.4%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.61 53.0 3.73e-01 100.0% 79.4%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 39.0 3.37e-01 79.8% 43.3%
4uv3E01 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.59 50.0 3.74e-01 92.9% 67.0%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.58 39.0 3.37e-01 86.9% 42.9%
1cbyA00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.57 50.0 3.67e-01 97.6% 84.6%
2amhA00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.56 47.0 3.66e-01 95.2% 69.2%
3robA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.48e-01 84.5% 48.1%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 39.0 3.26e-01 82.1% 43.7%
4f8lA00 2.60.40.3590 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.19e-01 71.4% 72.5%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 39.0 2.60e-01 86.9% 17.3%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 37.0 3.31e-01 85.7% 47.3%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.31e-01 71.4% 70.0%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.35e-01 86.9% 47.1%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.53 46.0 3.59e-01 98.8% 61.7%
1yc9A02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.53 39.0 3.97e-01 78.6% 91.6%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 36.0 3.24e-01 82.1% 49.6%
2n8xA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.52 40.0 3.20e-01 79.8% 50.6%
4inaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 38.0 2.93e-01 78.6% 90.4%
2vzsA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.37e-01 71.4% 76.2%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.52 43.0 3.61e-01 92.9% 59.7%
8alzB04 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 35.0 3.28e-01 72.6% 76.4%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 36.0 3.00e-01 73.8% 76.7%
5dcaA08 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 35.0 3.23e-01 71.4% 72.7%
3f9sB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.47e-01 86.9% 52.5%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.38e-01 85.7% 50.0%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.51 42.0 3.60e-01 100.0% 56.3%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 3.66e-01 97.6% 84.5%
1lqvB00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 44.0 3.43e-01 94.0% 100.0%
6a5gA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 40.0 3.43e-01 90.5% 53.7%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1828117 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.91 86.0 5.01e-01 100.0% 14.6%
4371754 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.87 81.0 4.76e-01 100.0% 15.2%
5065294 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.78 59.0 4.61e-01 90.5% 39.4%
5075360 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.76 62.0 5.18e-01 85.7% 82.2%
5079612 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.75 63.0 4.49e-01 88.1% 85.8%
4556738 7503.1.1.1 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG 0.74 65.0 4.63e-01 96.4% 39.8%
5070308 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.73 60.0 4.97e-01 88.1% 81.4%
5046602 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.72 61.0 4.44e-01 90.5% 78.1%
4932238 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.71 60.0 4.46e-01 90.5% 83.9%
1168678 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.71 47.0 5.48e-01 73.8% 100.0%
3803010 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.71 65.0 4.52e-01 100.0% 70.2%
3965061 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.69 62.0 4.38e-01 100.0% 46.9%
5043164 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.69 58.0 4.17e-01 90.5% 73.9%
4978641 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.69 57.0 4.17e-01 90.5% 77.3%
3933957 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.69 53.0 4.30e-01 95.2% 43.8%
5025337 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.68 57.0 4.25e-01 90.5% 77.6%
135591 265.1.1.4 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › PhiCb5_coat 0.68 49.0 4.35e-01 88.1% 52.5%
5001271 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.67 52.0 4.52e-01 83.3% 78.5%
3398781 5087.3.1.2 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd 0.67 59.0 4.02e-01 95.2% 46.3%
5042035 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.67 56.0 4.14e-01 91.7% 87.2%
5014260 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.66 52.0 4.54e-01 83.3% 60.8%
1502527 5089.1.1.4 ↗ beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF_1 0.66 58.0 3.95e-01 96.4% 64.1%
3977398 5084.1.1.16 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.63 54.0 4.38e-01 94.0% 61.3%
4492722 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.63 50.0 4.23e-01 85.7% 60.0%
4935004 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.62 49.0 4.28e-01 83.3% 61.6%
3991835 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.62 56.0 4.76e-01 100.0% 72.6%
4958526 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.62 48.0 4.22e-01 83.3% 61.6%
3392707 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.62 52.0 4.23e-01 91.7% 74.8%
5075688 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.61 48.0 4.00e-01 83.3% 53.8%
200993 5084.9.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR 0.61 53.0 3.73e-01 100.0% 79.4%
4101635 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.60 46.0 4.05e-01 81.0% 59.2%
5077129 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.60 48.0 4.21e-01 85.7% 64.8%
3717466 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.60 53.0 4.09e-01 100.0% 63.7%
3254506 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 45.0 3.58e-01 89.3% 41.2%
3239943 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 43.0 3.39e-01 76.2% 68.5%
4113088 5084.1.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.58 49.0 3.69e-01 91.7% 76.4%
5043104 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 45.0 3.87e-01 83.3% 63.7%
3892768 11.1.1.1054 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26562 0.58 40.0 3.54e-01 71.4% 74.2%
3372143 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.56 45.0 3.96e-01 86.9% 60.0%
3166002 7503.1.1.13 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 0.54 48.0 3.86e-01 98.8% 85.5%
4940004 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 3.89e-01 86.9% 76.7%
4672222 4010.1.1.3 ↗ a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_3 0.54 44.0 3.02e-01 86.9% 29.3%
5023738 11.1.1.1443 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 0.53 34.0 3.20e-01 75.0% 50.0%
3840054 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.53 46.0 3.90e-01 96.4% 59.3%
4959986 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 3.32e-01 70.2% 75.2%
3598427 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.52 40.0 3.38e-01 88.1% 48.6%
3220280 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.52 41.0 3.72e-01 84.5% 66.4%
2980101 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.52 44.0 3.21e-01 95.2% 55.8%
3021721 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.51 44.0 3.19e-01 95.2% 54.9%
3928044 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.09e-01 84.5% 70.0%
3189800 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 39.0 3.25e-01 82.1% 46.9%
D3 medium residues 204-297
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3846927 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 32.0 3.27e-01 100.0% 49.5%
3617671 11.1.1.673 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N 0.59 28.0 2.60e-01 86.2% 32.0%
D4 medium residues 365-392_409-517
PDB
Domain cluster: rep: OM868082.1__UPT53434.1__X__00064__D660-824
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.87 84.0 5.21e-01 100.0% 28.4%
1by5A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.84 81.0 5.18e-01 100.0% 37.4%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.84 81.0 5.23e-01 100.0% 31.6%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.83 79.0 5.35e-01 100.0% 33.9%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.82 78.0 4.88e-01 100.0% 26.1%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.82 69.0 5.11e-01 100.0% 39.1%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.81 77.0 4.98e-01 100.0% 30.2%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.81 78.0 4.99e-01 100.0% 35.0%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.79 74.0 4.81e-01 100.0% 35.4%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.78 75.0 5.33e-01 100.0% 38.7%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.78 74.0 5.26e-01 100.0% 37.4%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.78 75.0 4.79e-01 100.0% 34.4%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.77 59.0 4.50e-01 100.0% 37.4%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.77 73.0 4.90e-01 100.0% 42.1%
8p97A01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.77 73.0 4.62e-01 100.0% 43.9%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.77 62.0 4.65e-01 98.5% 36.6%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.74 68.0 5.26e-01 97.1% 51.6%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.73 66.0 5.30e-01 95.6% 58.8%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.73 70.0 5.19e-01 99.3% 51.8%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.72 67.0 4.68e-01 100.0% 47.2%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.71 67.0 4.67e-01 100.0% 38.1%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 67.0 4.58e-01 100.0% 52.3%
1tk1A00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.70 50.0 4.19e-01 88.3% 45.7%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.70 58.0 4.97e-01 95.6% 57.6%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 65.0 4.57e-01 100.0% 35.4%
4c4vB02 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.70 64.0 4.62e-01 98.5% 38.9%
1bt9A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.68 65.0 4.72e-01 100.0% 40.9%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.68 62.0 4.51e-01 100.0% 39.0%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.68 65.0 4.51e-01 100.0% 36.3%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.66 61.0 4.52e-01 100.0% 40.0%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.65 51.0 4.99e-01 86.1% 75.0%
6wulB01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.65 61.0 4.43e-01 100.0% 65.2%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.65 60.0 4.85e-01 98.5% 59.0%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.62 35.0 3.25e-01 93.4% 41.9%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.62 57.0 4.34e-01 97.8% 50.3%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.61 46.0 4.55e-01 91.2% 73.5%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.61 45.0 4.59e-01 92.7% 78.9%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.60 50.0 4.36e-01 87.6% 63.2%
5eo6B00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.60 50.0 3.82e-01 88.3% 66.4%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 51.0 4.69e-01 89.1% 71.5%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.59 54.0 3.96e-01 100.0% 51.4%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 41.0 4.14e-01 89.8% 72.6%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.58 41.0 4.35e-01 92.7% 82.5%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 47.0 4.56e-01 88.3% 83.9%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.71e-01 70.8% 84.1%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.56 45.0 4.11e-01 87.6% 88.9%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.56 45.0 4.10e-01 89.1% 84.5%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.55 40.0 3.82e-01 83.9% 65.8%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.55 46.0 4.51e-01 92.7% 82.0%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.53 43.0 4.15e-01 92.7% 75.5%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 47.0 4.30e-01 94.2% 84.5%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 45.0 3.22e-01 95.6% 70.5%
3ty1A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 44.0 3.20e-01 93.4% 87.8%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 45.0 3.19e-01 97.1% 89.7%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 43.0 3.80e-01 95.6% 64.7%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971477 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.90 87.0 5.44e-01 100.0% 30.9%
4870099 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.90 86.0 5.51e-01 100.0% 34.1%
3964119 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.89 86.0 5.96e-01 100.0% 48.6%
3970531 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.89 85.0 5.32e-01 100.0% 29.5%
3968958 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.85 82.0 5.15e-01 100.0% 33.3%
2719886 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.80 75.0 4.54e-01 100.0% 35.5%
2755875 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.80 76.0 4.92e-01 100.0% 29.4%
4546669 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.78 75.0 5.16e-01 100.0% 34.3%
3941401 5084.5.2.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.78 67.0 4.69e-01 100.0% 31.4%
4618904 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.78 74.0 5.17e-01 100.0% 35.8%
3964794 5084.5.4.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.78 72.0 5.81e-01 100.0% 55.4%
1761798 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.78 75.0 4.79e-01 100.0% 34.4%
4437932 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.77 71.0 5.23e-01 97.8% 45.5%
4135567 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.77 73.0 5.10e-01 100.0% 35.2%
4622073 5084.5.4.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.76 73.0 5.33e-01 100.0% 43.4%
4393174 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.76 72.0 5.09e-01 100.0% 36.1%
3965061 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.76 71.0 5.60e-01 98.5% 61.5%
3971932 5084.3.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.76 70.0 4.45e-01 98.5% 25.6%
4009143 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.76 69.0 5.09e-01 97.1% 44.9%
3838722 5084.3.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.75 70.0 5.23e-01 98.5% 50.0%
3980621 5084.5.1.8 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.75 60.0 5.04e-01 97.8% 52.6%
3966665 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.74 71.0 4.80e-01 100.0% 37.1%
885 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.74 68.0 5.26e-01 97.1% 51.6%
4242795 5084.10.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.74 70.0 4.53e-01 100.0% 26.9%
3976425 5084.5.1.8 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.73 58.0 4.93e-01 97.1% 53.3%
3942551 5084.5.2.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.73 68.0 4.69e-01 100.0% 49.0%
4064323 5084.5.2.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.72 68.0 4.69e-01 100.0% 40.6%
4006163 5084.5.4.13 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG 0.71 65.0 4.94e-01 100.0% 45.1%
3979319 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.71 64.0 4.89e-01 96.4% 49.8%
3945018 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.71 67.0 4.69e-01 100.0% 37.4%
4244652 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.71 65.0 4.58e-01 100.0% 41.0%
4533056 5084.5.2.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.70 67.0 4.59e-01 100.0% 37.1%
3964572 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.70 64.0 4.90e-01 97.1% 46.4%
4009884 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.70 64.0 4.89e-01 99.3% 52.8%
3803010 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.70 65.0 5.20e-01 100.0% 78.4%
4664957 5084.5.2.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like 0.70 64.0 4.48e-01 97.1% 36.5%
3967063 5084.1.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.69 64.0 5.00e-01 100.0% 52.7%
3970589 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.69 62.0 4.55e-01 98.5% 38.2%
4571005 5084.5.1.66 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF2490 0.69 59.0 5.07e-01 97.1% 60.6%
4668983 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.68 54.0 5.09e-01 89.8% 70.6%
3839133 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.68 60.0 4.27e-01 98.5% 33.6%
3964588 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.67 62.0 4.72e-01 100.0% 47.1%
4458963 5084.5.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.67 62.0 4.46e-01 97.1% 38.2%
3594616 1100.1.1.0 ↗ beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein 0.67 50.0 4.08e-01 77.4% 46.9%
4009329 5084.5.1.27 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › NfrA_C 0.67 58.0 4.70e-01 100.0% 51.0%
3005729 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.67 62.0 4.49e-01 99.3% 41.3%
4449332 5084.5.1.18 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.66 60.0 4.48e-01 100.0% 42.0%
4856841 5084.5.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.66 61.0 4.46e-01 98.5% 52.4%
3398781 5087.3.1.2 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd 0.65 58.0 4.50e-01 95.6% 63.5%
139764 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.64 54.0 4.32e-01 92.0% 45.6%
3611705 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.64 60.0 4.29e-01 100.0% 57.6%
2410295 5084.5.4.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › PorV 0.64 59.0 4.96e-01 100.0% 64.0%
4505397 5087.1.1.0 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 0.63 56.0 4.64e-01 95.6% 59.6%
3838382 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.62 52.0 4.16e-01 88.3% 62.5%
3515197 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.61 48.0 4.51e-01 92.0% 66.5%
145377 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.61 49.0 4.77e-01 86.9% 75.7%
3506244 5084.1.1.16 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.61 50.0 4.57e-01 86.1% 78.7%
3787225 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.60 50.0 4.44e-01 87.6% 75.9%
3385673 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.60 46.0 4.36e-01 88.3% 68.1%
4222629 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.60 48.0 4.61e-01 83.9% 75.5%
3388060 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.59 51.0 4.59e-01 92.7% 74.6%
4116729 5084.1.1.6 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.59 48.0 4.47e-01 87.6% 68.8%
3326287 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.59 47.0 5.01e-01 83.9% 100.0%
3717466 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.58 51.0 4.55e-01 93.4% 71.1%
3838622 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.57 47.0 4.11e-01 89.1% 75.1%
4283551 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.57 47.0 4.10e-01 89.1% 93.8%
4417262 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.57 49.0 4.61e-01 92.7% 75.4%
4301927 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.56 47.0 4.01e-01 92.0% 73.8%
4285298 5084.1.1.29 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.56 49.0 4.34e-01 93.4% 69.5%
191268 5084.1.1.9 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.55 46.0 4.51e-01 92.7% 82.0%
3839285 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.54 46.0 4.15e-01 92.7% 80.5%
3964096 5084.1.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.52 46.0 4.28e-01 97.1% 96.0%
3840054 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.52 44.0 4.43e-01 92.7% 91.4%
3970312 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.52 44.0 4.05e-01 92.7% 71.1%
4042627 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.52 44.0 4.16e-01 92.7% 76.8%
3980468 5084.1.1.9 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.52 42.0 4.00e-01 89.8% 72.7%
D5 medium residues 518-630_691-710
PDB
Domain cluster: rep: IMGVR_UViG_3300010155_003386-3300010155-Ga0098047_1000074611__D608-750
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00593.31 best TonB_dep_Rec_b-barrel 55.0 1.80e-14 96.2% 25.5%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cslA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.82 78.0 4.88e-01 100.0% 37.8%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.82 79.0 4.86e-01 100.0% 28.9%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.79 35.0 5.29e-01 82.7% 96.6%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.77 32.0 4.76e-01 82.0% 88.3%
3fhhA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.76 72.0 4.69e-01 100.0% 36.8%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.74 69.0 4.48e-01 100.0% 35.8%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.73 70.0 4.47e-01 100.0% 33.6%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.71 67.0 4.60e-01 100.0% 39.0%
3v89A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.70 66.0 4.19e-01 100.0% 33.8%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.70 66.0 4.41e-01 100.0% 49.8%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.68 64.0 4.00e-01 100.0% 26.3%
8p97A01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 63.0 4.00e-01 100.0% 30.0%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.62 58.0 3.79e-01 100.0% 49.2%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.62 58.0 3.95e-01 100.0% 41.5%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.61 57.0 3.72e-01 100.0% 44.2%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.61 48.0 3.62e-01 85.0% 36.8%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 44.0 3.95e-01 83.5% 55.5%
3bryA00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.59 54.0 3.84e-01 100.0% 41.9%
2wyhB06 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.58 47.0 3.74e-01 88.7% 97.5%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.57 52.0 3.60e-01 100.0% 62.4%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.54 39.0 3.57e-01 91.0% 57.5%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.53 35.0 3.66e-01 91.7% 73.0%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.52 37.0 3.97e-01 80.5% 84.5%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.51 40.0 3.11e-01 94.0% 38.1%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.51 40.0 3.95e-01 97.7% 76.2%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1828117 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.91 88.0 5.46e-01 100.0% 34.8%
1760802 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.88 77.0 5.09e-01 91.0% 42.9%
2755875 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.83 79.0 5.08e-01 100.0% 34.7%
3391818 3070.2.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.81 46.0 5.30e-01 85.7% 75.8%
4870099 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.80 76.0 4.86e-01 100.0% 34.3%
3971477 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.80 76.0 4.76e-01 100.0% 32.1%
4256431 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.79 74.0 4.87e-01 100.0% 38.8%
3970531 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.78 75.0 4.67e-01 100.0% 35.5%
4132216 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.77 74.0 4.56e-01 100.0% 33.0%
None — 0.77 72.0 4.80e-01 100.0% 40.0%
3971984 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.76 72.0 4.78e-01 100.0% 37.2%
1716664 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.74 70.0 4.76e-01 100.0% 39.2%
4419539 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.73 70.0 4.18e-01 100.0% 26.9%
3969715 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.71 66.0 4.29e-01 100.0% 41.1%
4524066 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.71 67.0 4.24e-01 100.0% 31.7%
3979654 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.70 64.0 4.15e-01 100.0% 35.0%
3070253 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.69 64.0 4.23e-01 100.0% 35.9%
1933289 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.68 63.0 3.82e-01 100.0% 40.5%
3971597 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.65 60.0 4.37e-01 100.0% 56.7%
1883909 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.65 60.0 3.78e-01 100.0% 45.4%
3651800 71.1.1.12 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF620 0.64 40.0 3.93e-01 85.0% 57.2%
4878135 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.63 59.0 3.80e-01 100.0% 58.9%
4358482 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.63 59.0 3.62e-01 100.0% 41.1%
1718522 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.62 58.0 3.79e-01 100.0% 49.3%
4591311 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.62 58.0 3.53e-01 99.2% 51.5%
2719886 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.62 58.0 3.51e-01 100.0% 42.8%
3534691 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.60 36.0 3.32e-01 87.2% 46.1%
4213133 5084.5.1.6 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB 0.59 56.0 3.94e-01 100.0% 46.9%
3965397 5084.5.4.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.59 54.0 4.30e-01 100.0% 81.9%
3965621 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.59 54.0 3.36e-01 100.0% 31.5%
3978947 5084.5.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.59 54.0 3.85e-01 100.0% 49.1%
3969139 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.58 52.0 3.58e-01 97.0% 40.7%
4582939 5084.5.4.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.58 55.0 4.02e-01 100.0% 49.1%
3980921 5084.5.1.18 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.58 54.0 3.94e-01 100.0% 48.5%
5080405 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.57 42.0 3.91e-01 83.5% 61.6%
3838109 5084.9.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR 0.56 45.0 3.69e-01 84.2% 62.6%
3219914 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.54 47.0 4.33e-01 97.0% 83.9%
4581432 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.53 41.0 3.74e-01 82.7% 61.7%
4025435 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.52 44.0 3.87e-01 97.7% 62.1%
4668983 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.52 43.0 4.09e-01 97.7% 73.8%
3942118 5084.5.2.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.52 48.0 3.32e-01 100.0% 61.4%
3875809 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.51 42.0 3.91e-01 97.7% 69.7%
D6 medium residues 631-690
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 36.0 3.00e-01 100.0% 33.3%
3cyjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 41.0 3.21e-01 93.3% 36.1%
1f06A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 46.0 3.56e-01 91.7% 92.0%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 38.0 2.95e-01 98.3% 33.3%
1yc9A02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.53 44.0 3.94e-01 93.3% 66.3%
2x3fA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.52 37.0 3.11e-01 100.0% 45.0%
4a8jF00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 37.0 2.50e-01 100.0% 17.9%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4459947 230.1.1.0 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like 0.58 51.0 3.77e-01 100.0% 72.3%
3942790 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.56 38.0 3.79e-01 100.0% 67.7%
4030631 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.56 46.0 3.32e-01 100.0% 43.4%
3600330 3662.1.1.0 ↗ a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related 0.55 43.0 3.24e-01 88.3% 35.5%
3696611 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.54 41.0 2.62e-01 90.0% 71.0%
3917066 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.53 47.0 3.80e-01 100.0% 54.8%
2989372 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.52 39.0 2.62e-01 88.3% 81.6%
3507296 2484.1.1.104 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 0.51 41.0 3.20e-01 90.0% 40.6%
4954552 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.50 44.0 3.26e-01 100.0% 83.1%
4132478 706.2.1.1 ↗ beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 0.50 36.0 3.19e-01 78.3% 56.8%
D7 medium residues 711-772
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.84 76.0 4.32e-01 100.0% 11.0%
1by5A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.80 73.0 4.18e-01 100.0% 11.4%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.78 51.0 5.28e-01 93.5% 71.2%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.78 49.0 5.02e-01 91.9% 66.7%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.73 49.0 3.25e-01 95.2% 18.0%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.71 49.0 3.71e-01 95.2% 30.8%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.68 43.0 3.17e-01 90.3% 24.4%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.67 47.0 3.16e-01 96.8% 19.5%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.65 44.0 3.30e-01 91.9% 28.2%
1s3rA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.65 47.0 5.08e-01 93.5% 90.6%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 41.0 3.99e-01 95.2% 56.3%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.65 44.0 3.47e-01 91.9% 33.1%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.64 44.0 4.46e-01 95.2% 71.4%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.64 57.0 3.42e-01 100.0% 14.6%
4awdB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 3.55e-01 98.4% 24.7%
1ek9A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.63 53.0 3.21e-01 95.2% 53.0%
1t5rB00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.63 53.0 3.49e-01 95.2% 67.5%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 45.0 3.43e-01 91.9% 33.1%
3isyA00 2.60.40.2360 Mainly Beta › Sandwich › Immunoglobulin-like › Intracellular proteinase inhibitor BsuPI 0.62 52.0 4.20e-01 91.9% 70.9%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.62 55.0 3.22e-01 100.0% 11.5%
3zghA00 2.60.40.3400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 52.0 3.77e-01 96.8% 69.5%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 43.0 3.43e-01 91.9% 36.1%
1q42A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 49.0 3.63e-01 90.3% 35.2%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.59 39.0 3.11e-01 91.9% 31.9%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 39.0 3.21e-01 91.9% 37.4%
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.58 48.0 4.14e-01 91.9% 59.2%
3tekA00 3.30.470.50 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.58 47.0 3.67e-01 90.3% 85.6%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.58 40.0 3.34e-01 91.9% 41.7%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 38.0 3.03e-01 88.7% 31.1%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 38.0 3.02e-01 91.9% 32.3%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 49.0 3.56e-01 100.0% 35.1%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 39.0 3.23e-01 93.5% 40.7%
6bjqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 4.10e-01 96.8% 64.8%
3qt2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.87e-01 98.4% 69.9%
3kd9A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 38.0 2.56e-01 93.5% 18.5%
3icsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 38.0 2.53e-01 93.5% 17.8%
3uezC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.06e-01 93.5% 68.7%
2cwrA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 46.0 4.00e-01 96.8% 82.5%
6a2bA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.08e-01 98.4% 78.7%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.77e-01 93.5% 73.7%
1o0vA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.74e-01 100.0% 70.9%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.65e-01 95.2% 72.1%
1jz7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 3.67e-01 98.4% 68.7%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 3.74e-01 98.4% 57.7%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.51 44.0 3.46e-01 98.4% 47.8%
3wlvA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.51 40.0 2.60e-01 88.7% 35.3%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1828117 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.88 80.0 4.52e-01 100.0% 10.4%
4644143 504.1.1.0 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.85 56.0 4.29e-01 95.2% 32.3%
5079481 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.77 50.0 3.56e-01 91.9% 24.0%
2491331 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.76 57.0 4.09e-01 95.2% 29.9%
4980169 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.70 51.0 3.20e-01 98.4% 14.6%
3405242 5084.5.1.37 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.70 50.0 3.56e-01 100.0% 25.7%
3967061 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.69 63.0 3.58e-01 100.0% 11.2%
3534592 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 49.0 5.15e-01 93.5% 85.5%
5044528 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.67 45.0 3.05e-01 96.8% 20.0%
3959921 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 49.0 4.54e-01 93.5% 60.8%
5056621 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.67 60.0 4.46e-01 100.0% 57.4%
3301984 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.67 48.0 5.08e-01 91.9% 87.3%
3614913 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.65 56.0 4.99e-01 93.5% 67.1%
3499841 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 43.0 3.87e-01 93.5% 47.8%
5022769 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 55.0 4.53e-01 95.2% 98.2%
5004168 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 56.0 4.62e-01 98.4% 69.1%
4002087 3698.1.1.1 ↗ beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C 0.63 48.0 3.56e-01 96.8% 31.9%
3628180 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.63 47.0 3.54e-01 98.4% 31.6%
4966673 11.1.1.51 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.63 52.0 4.35e-01 90.3% 69.5%
4927170 11.1.1.531 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.62 55.0 4.39e-01 100.0% 70.4%
5045939 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 52.0 4.60e-01 91.9% 78.9%
5049497 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 55.0 4.59e-01 100.0% 85.7%
3994841 11.1.5.64 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PIG-X 0.61 51.0 3.78e-01 90.3% 65.2%
5035834 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.61 51.0 4.96e-01 91.9% 100.0%
3880551 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.61 51.0 4.09e-01 90.3% 76.5%
4993821 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.34e-01 95.2% 72.8%
5056516 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.60 53.0 3.35e-01 98.4% 21.3%
4954926 11.1.5.142 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF27408 0.60 51.0 3.80e-01 96.8% 90.3%
5034853 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.03e-01 96.8% 62.0%
5021501 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 3.95e-01 95.2% 63.8%
5044740 11.1.1.531 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.59 52.0 4.42e-01 100.0% 88.6%
4981602 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.18e-01 98.4% 73.3%
3956463 321.1.1.0 ↗ a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase 0.59 48.0 3.20e-01 90.3% 82.7%
5054262 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 4.35e-01 91.9% 72.2%
3794791 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.59 50.0 3.69e-01 95.2% 79.4%
4960415 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.51e-01 96.8% 88.2%
4003274 4955.1.1.0 ↗ a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.58 48.0 3.33e-01 96.8% 90.2%
3789933 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.58 43.0 3.70e-01 93.5% 48.6%
4588551 63.1.1.5 ↗ beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › ATG27 0.58 49.0 3.58e-01 93.5% 35.8%
5051831 11.1.1.264 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GlcNase 0.57 49.0 4.11e-01 95.2% 69.5%
5047927 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 48.0 3.99e-01 93.5% 65.5%
3895932 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 49.0 4.11e-01 96.8% 72.4%
3454136 11.1.1.264 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GlcNase 0.57 49.0 3.98e-01 95.2% 71.9%
5010429 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 47.0 4.11e-01 93.5% 69.5%
2659065 265.1.1.3 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › AP205_coat 0.56 46.0 3.89e-01 88.7% 59.4%
1734926 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.56 46.0 4.40e-01 91.9% 88.0%
3390600 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.56 37.0 3.53e-01 91.9% 54.7%
3266207 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 3.87e-01 93.5% 63.5%
5033005 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 49.0 3.80e-01 100.0% 61.2%
3574350 210.2.1.0 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.56 48.0 3.17e-01 93.5% 61.3%
2659003 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.55 48.0 3.68e-01 95.2% 47.4%
1502527 5089.1.1.4 ↗ beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF_1 0.54 47.0 3.06e-01 98.4% 52.3%
4011378 63.1.1.0 ↗ beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain 0.54 46.0 3.31e-01 95.2% 33.5%
4937707 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 3.47e-01 91.9% 55.6%
3609405 11.1.1.647 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GAE_BBS1 0.54 46.0 3.81e-01 95.2% 64.5%
3790830 11.1.1.378 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 0.54 44.0 3.18e-01 88.7% 60.0%
3244989 11.1.1.647 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GAE_BBS1 0.54 46.0 3.81e-01 95.2% 64.5%
3585269 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.54 47.0 3.33e-01 100.0% 90.0%
3183957 63.1.1.5 ↗ beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › ATG27 0.54 46.0 3.31e-01 98.4% 33.3%
5005124 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 3.85e-01 100.0% 69.1%
3992801 11.1.1.532 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 0.53 45.0 3.98e-01 96.8% 64.4%
5029145 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.05e-01 96.8% 73.3%
3518476 11.1.1.647 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GAE_BBS1 0.53 46.0 3.81e-01 96.8% 66.4%
3608271 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 41.0 2.65e-01 90.3% 60.0%
3930755 11.1.1.647 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GAE_BBS1 0.53 45.0 3.58e-01 98.4% 56.2%
3968185 5085.1.1.1 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.52 38.0 2.34e-01 93.5% 11.4%
3892777 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.51 43.0 3.60e-01 91.9% 71.4%
224067 6098.1.1.1 ↗ a+b two layers › BACOVA_05496-like › BACOVA_05496-like › BACOVA_05496-like › DUF4738 0.51 44.0 3.46e-01 98.4% 47.8%
5058531 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 42.0 3.65e-01 95.2% 71.0%
5056456 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.50 42.0 3.72e-01 95.2% 96.8%