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MZ675741.1__UFJ83272.1__X__00034
Bact-VirMZ675741.1__UFJ83272.1__X__00034
Identity
- Accession:
- MZ675741 ↗
- Kingdom:
- phage
Quality
81.2
mean pLDDT
Taxonomy
TaxID: 2897426
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.59 | 43.0 | 3.43e-01 | 100.0% | 36.5% |
| 2jvwA01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.57 | 47.0 | 4.64e-01 | 100.0% | 85.0% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 49.0 | 4.18e-01 | 100.0% | 76.3% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 37.0 | 3.27e-01 | 100.0% | 43.5% |
| 1eg7A02 | 3.30.1510.10 | Alpha Beta › 2-Layer Sandwich › Domain 2, N(10)-formyltetrahydrofolate synthetase › Domain 2, N(10)-formyltetrahydrofolate synthetase | 0.53 | 45.0 | 3.59e-01 | 100.0% | 69.7% |
| 1c4zA01 | 3.90.1750.10 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains | 0.52 | 43.0 | 3.09e-01 | 90.9% | 60.0% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 42.0 | 3.87e-01 | 87.3% | 76.1% |
| 2b61A02 | 1.10.1740.110 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.52 | 42.0 | 3.58e-01 | 100.0% | 51.9% |
| 3emrA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 39.0 | 2.58e-01 | 89.1% | 54.0% |
| 3vywA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 2.89e-01 | 100.0% | 23.0% |
| 6jgwA01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.50 | 40.0 | 3.20e-01 | 90.9% | 41.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1916723 | 386.1.1.23 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_3 | 0.66 | 31.0 | 3.87e-01 | 100.0% | 71.0% |
| 2665492 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.63 | 47.0 | 3.59e-01 | 100.0% | 33.1% |
| 3286117 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.60 | 44.0 | 3.48e-01 | 100.0% | 36.0% |
| 3976015 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.60 | 44.0 | 3.97e-01 | 100.0% | 56.2% |
| 3958148 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 44.0 | 3.43e-01 | 100.0% | 34.1% |
| 4536234 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.59 | 44.0 | 3.55e-01 | 100.0% | 40.0% |
| 4057677 | 3001.1.1.1 ↗ | alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 | 0.59 | 36.0 | 3.12e-01 | 96.4% | 38.8% |
| 3387406 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.59 | 43.0 | 3.63e-01 | 100.0% | 43.8% |
| 3802814 | 2488.1.1.18 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › DTW | 0.58 | 50.0 | 3.17e-01 | 100.0% | 72.3% |
| 4518241 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.58 | 42.0 | 3.90e-01 | 100.0% | 60.0% |
| 1827815 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.58 | 42.0 | 3.99e-01 | 100.0% | 66.2% |
| 3946914 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.57 | 42.0 | 3.34e-01 | 100.0% | 35.4% |
| 3943313 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.57 | 42.0 | 3.45e-01 | 100.0% | 40.0% |
| 4254112 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.57 | 44.0 | 3.79e-01 | 94.5% | 52.2% |
| 4980892 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.57 | 44.0 | 3.48e-01 | 90.9% | 40.0% |
| 4546356 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 44.0 | 3.79e-01 | 85.5% | 83.5% |
| 3394655 | 603.1.1.104 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 | 0.55 | 43.0 | 2.66e-01 | 87.3% | 14.8% |
| 4963809 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.53 | 46.0 | 2.92e-01 | 100.0% | 45.3% |
| 3805561 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.53 | 39.0 | 3.13e-01 | 92.7% | 37.6% |
| 4144335 | 304.48.1.24 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 | 0.52 | 47.0 | 3.00e-01 | 100.0% | 50.4% |
| 5042767 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 45.0 | 3.69e-01 | 94.5% | 75.5% |
| 5047150 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 41.0 | 2.79e-01 | 87.3% | 96.5% |
| 4082175 | 3001.1.1.1 ↗ | alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 | 0.52 | 36.0 | 3.17e-01 | 100.0% | 48.2% |
| 3367703 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.52 | 38.0 | 3.04e-01 | 92.7% | 36.8% |
| 3296786 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.51 | 38.0 | 3.10e-01 | 90.9% | 39.2% |
| 3308318 | 192.2.1.31 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PRA1 | 0.51 | 43.0 | 3.36e-01 | 100.0% | 77.7% |
| 136564 | 10.12.1.25 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH | 0.51 | 39.0 | 2.58e-01 | 89.1% | 53.8% |
| 3379716 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.51 | 37.0 | 2.98e-01 | 92.7% | 36.8% |
| 4030472 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.50 | 43.0 | 3.01e-01 | 100.0% | 43.2% |
| None | — | 0.50 | 39.0 | 2.87e-01 | 100.0% | 82.0% | |
| 3311239 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.50 | 38.0 | 3.02e-01 | 90.9% | 38.4% |
D2
high
residues 72-125
Domain cluster:
rep: CAKLQH020000049.1__CAH1096256.1__SAMEA5780036_03876__00020__D7-60