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MZ726797.1__UAW58825.1__AVIO78A_040__00040

Bact-Vir

MZ726797.1__UAW58825.1__AVIO78A_040__00040

Identity

Accession:
MZ726797 ↗
Kingdom:
phage

Quality

93.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nonanavirus› Escherichia_phage_vB_EcoS_AVIO78A

TaxID: 2873450

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-68
PDB
Domain cluster: rep: SR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00088__D20-68
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 70.0 6.25e-01 100.0% 81.9%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 61.0 5.57e-01 100.0% 67.6%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 62.0 5.86e-01 100.0% 77.4%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 61.0 5.87e-01 100.0% 79.7%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 5.93e-01 100.0% 77.8%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 5.05e-01 100.0% 46.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 58.0 5.71e-01 100.0% 80.4%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 65.0 5.63e-01 100.0% 65.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 58.0 5.72e-01 100.0% 82.1%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.88e-01 100.0% 95.9%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.79e-01 100.0% 83.9%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 4.55e-01 100.0% 55.0%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.67 60.0 4.87e-01 100.0% 78.9%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.65 54.0 4.06e-01 98.1% 76.6%
2kcoA01 2.40.10.310 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 58.0 5.08e-01 100.0% 81.6%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.64 51.0 5.07e-01 94.2% 89.3%
3kyaA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 53.0 3.24e-01 98.1% 23.4%
5aj3E01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.62 52.0 4.63e-01 100.0% 85.2%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.72e-01 100.0% 91.2%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 50.0 3.06e-01 96.2% 19.9%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 2.98e-01 98.1% 20.4%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 47.0 3.99e-01 94.2% 84.0%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.58 43.0 3.52e-01 86.5% 68.1%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.18e-01 100.0% 73.7%
1ewiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 44.0 3.57e-01 90.4% 60.5%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 31.0 2.54e-01 86.5% 24.0%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 44.0 3.18e-01 86.5% 50.7%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 38.0 3.01e-01 73.1% 91.5%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.55 42.0 3.52e-01 88.5% 81.0%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 44.0 2.91e-01 96.2% 41.9%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.55 38.0 3.24e-01 100.0% 42.9%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 42.0 3.53e-01 94.2% 74.0%
2d9vA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 48.0 3.77e-01 100.0% 77.8%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.47e-01 94.2% 54.5%
5mghA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 41.0 2.61e-01 88.5% 44.6%
3t2lA02 2.60.40.2630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 44.0 3.31e-01 100.0% 84.9%
3i1aA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 44.0 3.63e-01 98.1% 85.4%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.53 44.0 3.45e-01 98.1% 87.9%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 3.22e-01 100.0% 35.8%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.52 43.0 3.47e-01 96.2% 63.3%
1sg1X02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.52 33.0 2.90e-01 86.5% 43.0%
2jc4A00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.51 42.0 2.78e-01 98.1% 98.0%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 3.65e-01 94.2% 92.9%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3886492 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.83 76.0 6.66e-01 100.0% 74.7%
3938484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 75.0 5.62e-01 100.0% 45.8%
3826141 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 72.0 6.00e-01 100.0% 73.3%
3622641 4.1.1.85 ↗ beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.79 71.0 5.33e-01 100.0% 66.7%
3410370 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.44e-01 100.0% 81.4%
3931161 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 5.31e-01 100.0% 49.6%
3573739 4.1.1.85 ↗ beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.78 69.0 5.32e-01 100.0% 68.7%
2157301 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.78 69.0 6.17e-01 100.0% 78.1%
3184389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 67.0 4.61e-01 100.0% 46.3%
3441143 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.73 65.0 5.24e-01 100.0% 56.0%
3550699 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.73 64.0 5.28e-01 100.0% 62.1%
3615113 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.72 64.0 4.56e-01 100.0% 45.5%
3676628 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.72 66.0 4.94e-01 100.0% 47.5%
4020096 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 59.0 4.33e-01 100.0% 50.7%
4618633 4.26.1.1 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.66 53.0 5.19e-01 94.2% 86.4%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 58.0 5.41e-01 100.0% 81.5%
4807995 4.1.1.314 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like 0.64 52.0 3.39e-01 94.2% 43.2%
5043533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 57.0 5.33e-01 100.0% 84.4%
3258685 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 42.0 3.28e-01 71.2% 46.1%
4032084 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.61 50.0 4.21e-01 94.2% 55.8%
3592742 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 43.0 3.65e-01 94.2% 43.3%
3251948 375.1.3.2 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › MRNIP 0.61 43.0 4.12e-01 100.0% 65.0%
4032882 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.60 49.0 4.15e-01 94.2% 57.0%
4177936 2004.1.1.929 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FliJ 0.60 40.0 2.41e-01 100.0% 9.0%
5026090 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.59 48.0 4.38e-01 94.2% 66.7%
3380327 5.1.10.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › WD40_RFWD3 0.58 48.0 3.92e-01 94.2% 59.0%
5079843 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 48.0 4.58e-01 100.0% 81.5%
4019104 2003.1.3.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.57 47.0 2.77e-01 100.0% 33.3%
3507723 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.56 34.0 2.95e-01 94.2% 38.7%
3562936 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.56 34.0 2.96e-01 96.2% 40.0%
3683968 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 45.0 3.25e-01 94.2% 35.8%
3620698 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.54 40.0 3.42e-01 84.6% 85.3%
3594576 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.56e-01 100.0% 72.7%
3264469 4.1.1.309 ↗ beta barrels › SH3 › SH3 › SH3 › MRP-S34 0.53 43.0 3.82e-01 100.0% 74.1%
3516145 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 46.0 4.03e-01 100.0% 72.5%
4159881 220.1.1.197 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 0.52 46.0 3.80e-01 100.0% 72.6%
3476661 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.55e-01 94.2% 86.0%
3516025 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 41.0 3.40e-01 94.2% 55.2%
5028514 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.51 40.0 3.88e-01 100.0% 76.7%
3942564 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.51 43.0 2.80e-01 100.0% 41.9%
3894281 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.51 34.0 2.88e-01 88.5% 41.2%
3974731 601.52.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › FlgK_D1 0.51 40.0 2.51e-01 100.0% 14.1%
5034626 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 35.0 3.81e-01 92.3% 100.0%