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MZ773648.1__UAT28863.1__R7L_gp24__00024
Bact-VirMZ773648.1__UAT28863.1__R7L_gp24__00024
Identity
- Accession:
- MZ773648 ↗
- Kingdom:
- phage
Quality
66.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Gonggongvirus›
Dinoroseobacter_phage_vB_DshP-R7L
TaxID: 2873349
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-146
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.91 | 76.0 | 6.37e-01 | 87.3% | 75.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.84 | 61.0 | 5.09e-01 | 76.1% | 89.7% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.82 | 61.0 | 5.18e-01 | 77.5% | 89.9% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.81 | 67.0 | 4.15e-01 | 87.3% | 18.7% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.81 | 63.0 | 6.12e-01 | 83.1% | 94.8% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.79 | 59.0 | 5.02e-01 | 77.5% | 89.0% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.77 | 52.0 | 4.40e-01 | 70.4% | 80.5% |
| 3n2oA03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 56.0 | 5.01e-01 | 76.1% | 72.9% |
| 3n71A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.77 | 60.0 | 4.17e-01 | 83.1% | 32.4% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.76 | 53.0 | 5.13e-01 | 71.8% | 100.0% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.74 | 62.0 | 5.53e-01 | 91.5% | 96.0% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.74 | 54.0 | 5.39e-01 | 78.9% | 100.0% |
| 3fp3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 58.0 | 4.71e-01 | 85.9% | 65.2% |
| 4i9cA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 56.0 | 3.88e-01 | 81.7% | 27.6% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.72 | 55.0 | 4.74e-01 | 83.1% | 68.4% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 59.0 | 5.43e-01 | 90.1% | 98.9% |
| 2gs8A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.71 | 59.0 | 4.62e-01 | 87.3% | 67.9% |
| 4nq0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 59.0 | 3.94e-01 | 88.7% | 26.4% |
| 1quuA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 61.0 | 5.12e-01 | 98.6% | 89.7% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 49.0 | 4.76e-01 | 74.6% | 65.0% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 59.0 | 5.37e-01 | 97.2% | 90.7% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.69 | 55.0 | 4.90e-01 | 87.3% | 62.7% |
| 5m9dA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 48.0 | 3.86e-01 | 73.2% | 52.9% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.69 | 54.0 | 4.01e-01 | 87.3% | 36.1% |
| 2wwxB00 | 1.20.1260.70 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.68 | 62.0 | 4.41e-01 | 100.0% | 86.5% |
| 3mekA04 | 1.25.40.970 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 51.0 | 4.95e-01 | 81.7% | 80.0% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 56.0 | 5.00e-01 | 94.4% | 100.0% |
| 6z0fA02 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.66 | 57.0 | 4.29e-01 | 95.8% | 40.4% |
| 1np7A02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 51.0 | 4.28e-01 | 83.1% | 63.9% |
| 6xssA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 45.0 | 4.61e-01 | 77.5% | 75.4% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.65 | 57.0 | 4.89e-01 | 100.0% | 93.1% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 50.0 | 5.00e-01 | 85.9% | 89.3% |
| 5mdtA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 51.0 | 3.92e-01 | 85.9% | 52.0% |
| 2cr7A01 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.63 | 42.0 | 4.36e-01 | 71.8% | 77.8% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 46.0 | 4.81e-01 | 77.5% | 100.0% |
| 4kvmA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 49.0 | 2.96e-01 | 87.3% | 24.3% |
| 5l0wB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 53.0 | 4.36e-01 | 98.6% | 68.8% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.61 | 43.0 | 4.23e-01 | 76.1% | 69.3% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3660 | 633.10.1.1 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › 23S_rRNA_IVP | 0.92 | 76.0 | 6.35e-01 | 87.3% | 73.5% |
| 4927448 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.86 | 59.0 | 5.62e-01 | 70.4% | 98.8% |
| 3799055 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.85 | 60.0 | 3.82e-01 | 73.2% | 35.3% |
| 4088690 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.81 | 67.0 | 6.43e-01 | 90.1% | 97.5% |
| 4668964 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.81 | 66.0 | 6.22e-01 | 88.7% | 89.4% |
| 4231435 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.80 | 65.0 | 6.15e-01 | 88.7% | 89.4% |
| 4201754 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.80 | 72.0 | 6.52e-01 | 100.0% | 88.4% |
| 4474310 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.80 | 65.0 | 6.32e-01 | 90.1% | 96.2% |
| 4056285 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.78 | 70.0 | 6.35e-01 | 100.0% | 89.5% |
| 4181805 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.78 | 65.0 | 6.32e-01 | 91.5% | 96.2% |
| 4563321 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.78 | 69.0 | 6.57e-01 | 100.0% | 90.5% |
| 4063100 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.78 | 63.0 | 6.15e-01 | 90.1% | 92.5% |
| 3957298 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.78 | 65.0 | 6.08e-01 | 94.4% | 90.0% |
| 5050994 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.76 | 57.0 | 5.90e-01 | 78.9% | 100.0% |
| 4290271 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.76 | 67.0 | 6.20e-01 | 100.0% | 93.3% |
| 3436107 | 109.4.1.228 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo84_C | 0.75 | 58.0 | 4.00e-01 | 81.7% | 30.9% |
| 4970557 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.75 | 53.0 | 5.39e-01 | 74.6% | 100.0% |
| 3449639 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 60.0 | 4.83e-01 | 87.3% | 47.4% |
| 4061821 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.74 | 63.0 | 6.11e-01 | 95.8% | 90.0% |
| 3773905 | 604.3.1.33 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › RSLD_CPSF6 | 0.74 | 59.0 | 5.80e-01 | 84.5% | 98.7% |
| 3481781 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.73 | 56.0 | 5.40e-01 | 83.1% | 92.5% |
| 3169410 | 109.4.1.819 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec8_C | 0.72 | 63.0 | 3.61e-01 | 100.0% | 10.9% |
| 3744489 | 109.4.1.819 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec8_C | 0.71 | 62.0 | 3.58e-01 | 100.0% | 18.6% |
| 4646569 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.70 | 56.0 | 5.06e-01 | 85.9% | 88.4% |
| 3229748 | 1134.1.1.9 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › RSLD_CPSF6 | 0.70 | 61.0 | 5.75e-01 | 95.8% | 94.1% |
| 3889971 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.70 | 62.0 | 5.37e-01 | 98.6% | 75.5% |
| 3823906 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 57.0 | 3.82e-01 | 91.5% | 99.3% |
| 3672 | 4270.1.1.1 ↗ | alpha bundles › N-terminal domain of Hypothetical protein MPN330 › N-terminal domain of Hypothetical protein MPN330 › N-terminal domain of Hypothetical protein MPN330 › DUF3196 | 0.69 | 55.0 | 4.90e-01 | 87.3% | 62.7% |
| 3442729 | 109.4.1.1279 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 | 0.69 | 61.0 | 3.61e-01 | 97.2% | 13.1% |
| 3574981 | 604.12.1.91 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › RSLD_CPSF6 | 0.68 | 53.0 | 5.34e-01 | 83.1% | 100.0% |
| 3936356 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 58.0 | 3.38e-01 | 100.0% | 12.1% |
| 3339002 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.68 | 54.0 | 5.34e-01 | 84.5% | 82.7% |
| 4247950 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.68 | 60.0 | 5.45e-01 | 100.0% | 98.9% |
| 5031982 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.68 | 56.0 | 4.29e-01 | 91.5% | 59.4% |
| 3257258 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 50.0 | 4.60e-01 | 83.1% | 60.0% |
| 3367469 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.66 | 50.0 | 3.39e-01 | 78.9% | 35.8% |
| 3827125 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 48.0 | 3.57e-01 | 77.5% | 30.6% |
| 3654165 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.66 | 49.0 | 3.57e-01 | 77.5% | 47.4% |
| 3737309 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.65 | 43.0 | 4.45e-01 | 73.2% | 73.8% |
| 3975632 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.64 | 52.0 | 3.85e-01 | 94.4% | 34.1% |
| 3355208 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.64 | 51.0 | 2.97e-01 | 84.5% | 21.4% |
| 3699282 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.63 | 55.0 | 5.18e-01 | 97.2% | 97.6% |
| 3973899 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.59 | 48.0 | 3.84e-01 | 94.4% | 44.1% |
| None | — | 0.59 | 47.0 | 3.29e-01 | 93.0% | 45.0% | |
| 4175809 | 5086.1.1.88 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_CyaD | 0.56 | 51.0 | 3.86e-01 | 100.0% | 43.6% |
| 3475614 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.52 | 40.0 | 3.43e-01 | 88.7% | 63.1% |
D2
medium
residues 4-72
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kpqA01 | 6.10.250.730 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 50.0 | 4.94e-01 | 76.8% | 98.6% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.68 | 48.0 | 4.27e-01 | 72.5% | 87.4% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 45.0 | 4.31e-01 | 81.2% | 62.0% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.65 | 51.0 | 4.95e-01 | 82.6% | 80.0% |
| 1xgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.67e-01 | 78.3% | 89.6% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 45.0 | 4.65e-01 | 73.9% | 87.5% |
| 3f5bA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 42.0 | 3.14e-01 | 71.0% | 60.5% |
| 2i8eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 49.0 | 4.79e-01 | 88.4% | 100.0% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 4.06e-01 | 75.4% | 69.9% |
| 2mphA01 | 1.10.720.80 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.58 | 41.0 | 3.83e-01 | 75.4% | 64.4% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.56 | 38.0 | 4.31e-01 | 75.4% | 98.0% |
| 3d8pB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 38.0 | 2.96e-01 | 72.5% | 68.1% |
| 1q5nA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.55 | 42.0 | 4.03e-01 | 85.5% | 88.9% |
| 2ymvA02 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 44.0 | 3.03e-01 | 85.5% | 67.4% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.54 | 37.0 | 2.89e-01 | 82.6% | 30.7% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.54 | 31.0 | 3.57e-01 | 71.0% | 79.2% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.54 | 43.0 | 4.17e-01 | 88.4% | 98.7% |
| 1zpwX00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 47.0 | 4.51e-01 | 100.0% | 95.1% |
| 4e2aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 36.0 | 2.82e-01 | 71.0% | 65.3% |
| 3gfaA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.52 | 36.0 | 2.75e-01 | 76.8% | 78.6% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 41.0 | 3.04e-01 | 88.4% | 91.0% |
| 1y0nA00 | 1.10.10.610 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › YehU-like | 0.51 | 34.0 | 3.44e-01 | 94.2% | 67.6% |
| 3c8eA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 36.0 | 3.05e-01 | 76.8% | 64.6% |
| 6wqbA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 41.0 | 3.22e-01 | 87.0% | 99.3% |
| 3k7eB00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 40.0 | 3.00e-01 | 91.3% | 97.0% |
| 2fe7B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 37.0 | 2.87e-01 | 81.2% | 42.8% |
| 3t8iA00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.50 | 36.0 | 2.43e-01 | 78.3% | 78.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3378995 | 108.1.1.111 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › DUF7952 | 0.74 | 53.0 | 5.87e-01 | 73.9% | 100.0% |
| 5046103 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 53.0 | 5.16e-01 | 76.8% | 97.3% |
| 3193829 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.71 | 55.0 | 4.72e-01 | 82.6% | 69.5% |
| 3740939 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.70 | 54.0 | 5.01e-01 | 81.2% | 84.7% |
| 5046622 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 50.0 | 4.91e-01 | 75.4% | 97.3% |
| 3626688 | 101.1.2.451 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR3 | 0.69 | 53.0 | 4.96e-01 | 81.2% | 85.9% |
| 5073992 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.69 | 53.0 | 5.29e-01 | 81.2% | 100.0% |
| 4996898 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 51.0 | 5.31e-01 | 78.3% | 100.0% |
| 3953051 | 101.1.2.294 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF742 | 0.69 | 52.0 | 4.69e-01 | 81.2% | 87.4% |
| 4421410 | 101.1.2.451 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR3 | 0.69 | 50.0 | 4.13e-01 | 76.8% | 65.0% |
| 4368579 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.68 | 53.0 | 4.83e-01 | 82.6% | 81.1% |
| 3750799 | 101.1.3.21 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › NPR2 | 0.68 | 53.0 | 4.82e-01 | 82.6% | 81.1% |
| 3893983 | 101.1.2.451 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR3 | 0.68 | 52.0 | 4.56e-01 | 81.2% | 77.0% |
| 3884579 | 101.1.1.161 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › NPR2 | 0.68 | 53.0 | 4.81e-01 | 82.6% | 81.1% |
| 3323366 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 53.0 | 5.14e-01 | 87.0% | 100.0% |
| 3352389 | 101.1.10.58 ↗ | alpha arrays › HTH › HTH › Cyclin-like › PF30926 | 0.64 | 45.0 | 4.85e-01 | 79.7% | 94.5% |
| 4150316 | 101.1.2.451 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR3 | 0.63 | 55.0 | 5.32e-01 | 92.8% | 100.0% |
| 3625739 | 101.1.1.161 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › NPR2 | 0.63 | 55.0 | 4.34e-01 | 94.2% | 89.6% |
| 3592956 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 48.0 | 4.73e-01 | 87.0% | 93.3% |
| 4355153 | 101.1.2.451 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR3 | 0.61 | 52.0 | 3.74e-01 | 94.2% | 70.8% |
| 3724376 | 101.1.2.451 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR3 | 0.61 | 52.0 | 4.99e-01 | 94.2% | 97.5% |
| 3244288 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.60 | 53.0 | 4.40e-01 | 94.2% | 93.0% |
| 4981837 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 50.0 | 3.02e-01 | 89.9% | 21.1% |
| 3637864 | 101.1.1.344 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › NPR3 | 0.60 | 50.0 | 4.40e-01 | 91.3% | 76.0% |
| None | — | 0.57 | 43.0 | 2.57e-01 | 79.7% | 66.8% | |
| 5079502 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.57 | 45.0 | 3.38e-01 | 92.8% | 71.4% |
| 3188373 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.56 | 41.0 | 2.47e-01 | 79.7% | 58.3% |
| 3610728 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.55 | 39.0 | 2.59e-01 | 75.4% | 34.9% |
| 4025066 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 38.0 | 2.79e-01 | 72.5% | 55.7% |
| 152133 | 325.1.2.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Molybdopterin synthase subunit MoaE | 0.55 | 40.0 | 3.26e-01 | 78.3% | 72.4% |
| 4320402 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.54 | 42.0 | 2.95e-01 | 87.0% | 76.1% |
| 5056782 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.52 | 38.0 | 2.74e-01 | 82.6% | 72.5% |
| 5060698 | 213.1.1.19 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 | 0.51 | 39.0 | 3.08e-01 | 84.1% | 87.3% |
| 3376984 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 43.0 | 2.72e-01 | 100.0% | 90.9% |