←Back to structures

MZ773648.1__UAT28865.1__R7L_gp26__00026

Bact-Vir

MZ773648.1__UAT28865.1__R7L_gp26__00026

Identity

Accession:
MZ773648 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Gonggongvirus› Dinoroseobacter_phage_vB_DshP-R7L

TaxID: 2873349

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-145
PDB
Domain cluster: rep: NC_048765.1__YP_009845729.1__HWC21_gp073__00073__D2-98
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tr8A01 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.57 24.0 3.64e-01 79.8% 96.2%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 34.0 3.48e-01 80.6% 69.1%
2ychA02 3.30.1490.300 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.51 24.0 3.16e-01 75.2% 86.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940521 3124.1.1.1 ↗ beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC 0.56 23.0 3.54e-01 79.1% 98.0%
3602454 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.53 27.0 3.55e-01 77.5% 86.5%
3253248 3468.1.1.0 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain 0.53 39.0 3.94e-01 77.5% 78.5%
2330653 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.50 35.0 3.96e-01 81.4% 97.9%