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MZ870514.1__UAW00998.1__X__00049
Bact-VirMZ870514.1__UAW00998.1__X__00049
Identity
- Accession:
- MZ870514 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Taxonomy
TaxID: 2873346
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-110
Domain cluster:
rep: MW057859.1__QPB12515.1__X__00050__D5-105
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04383.20 best | KilA-N | 83.2 | 1.50e-23 | 99.1% | 93.5% |
D2
medium
residues 154-224
Domain cluster:
rep: NC_019717.1__YP_007112196.1__F845_gp63__00063__D26-90
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g27A01 | 3.30.50.20 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › prophage-derive protein ybcO | 0.82 | 65.0 | 6.70e-01 | 97.2% | 90.9% |
| 4i6vA02 | 1.10.2020.10 | Mainly Alpha › Orthogonal Bundle › uronate isomerase, domain 2, chain A › uronate isomerase, domain 2, chain A | 0.60 | 40.0 | 3.86e-01 | 85.9% | 59.5% |
| 2eo4A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.59 | 46.0 | 3.61e-01 | 83.1% | 89.3% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.58 | 45.0 | 4.29e-01 | 87.3% | 95.4% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.58 | 46.0 | 3.20e-01 | 87.3% | 42.1% |
| 3fi9A02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.57 | 49.0 | 3.71e-01 | 98.6% | 42.7% |
| 4dwnA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 41.0 | 3.78e-01 | 85.9% | 58.8% |
| 3vpxB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 43.0 | 3.18e-01 | 87.3% | 92.0% |
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.52 | 43.0 | 3.36e-01 | 95.8% | 44.1% |
| 1c1dA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 40.0 | 3.00e-01 | 88.7% | 91.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964177 | 377.7.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › YbcO | 0.81 | 73.0 | 6.73e-01 | 98.6% | 95.6% |
| 119353 | 377.7.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › YbcO | 0.74 | 66.0 | 6.34e-01 | 97.2% | 95.1% |
| 2449258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.71 | 55.0 | 4.23e-01 | 91.5% | 36.6% |
| 3724380 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.61 | 46.0 | 4.23e-01 | 81.7% | 85.3% |
| 3587045 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.60 | 49.0 | 3.25e-01 | 90.1% | 80.0% |
| 4986203 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.60 | 50.0 | 3.48e-01 | 94.4% | 72.4% |
| 3809926 | 2498.1.1.92 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF7906 | 0.58 | 46.0 | 3.12e-01 | 87.3% | 94.8% |
| 3397473 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.58 | 50.0 | 4.26e-01 | 98.6% | 91.7% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.57 | 46.0 | 4.10e-01 | 100.0% | 60.0% |
| 3561303 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.57 | 50.0 | 3.87e-01 | 100.0% | 69.1% |
| 3953218 | 378.1.1.23 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 | 0.56 | 48.0 | 3.82e-01 | 100.0% | 47.7% |
| 3188760 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 48.0 | 3.21e-01 | 100.0% | 57.5% |
| 3610491 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 44.0 | 2.99e-01 | 87.3% | 40.8% |
| 4979945 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.53 | 37.0 | 3.10e-01 | 73.2% | 83.2% |
| 4241236 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.52 | 44.0 | 4.27e-01 | 95.8% | 86.3% |