Back to structures

MZ892987.1__UAW58958.1__CRP207_gp68__00068

Bact-Vir

MZ892987.1__UAW58958.1__CRP207_gp68__00068

Identity

Accession:
MZ892987 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-47
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.60 48.0 3.72e-01 100.0% 68.2%
1u7pD00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 46.0 3.16e-01 100.0% 80.7%
5d0iB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 39.0 3.78e-01 80.5% 76.5%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 39.0 2.59e-01 75.6% 37.3%
3d2fA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.54 39.0 3.23e-01 78.0% 64.5%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 3.67e-01 92.7% 85.5%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 40.0 3.01e-01 80.5% 55.3%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 3.64e-01 90.2% 75.8%
6gfaA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.53 37.0 3.45e-01 78.0% 87.5%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.52 38.0 2.99e-01 87.8% 53.8%
4ap5A01 3.40.50.11340 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 38.0 2.54e-01 90.2% 85.0%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.50 37.0 3.48e-01 87.8% 82.5%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5048065 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 42.0 3.26e-01 73.2% 51.0%
3973145 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 48.0 4.43e-01 90.2% 78.2%
3819067 386.1.1.207 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 0.59 39.0 3.43e-01 70.7% 47.7%
3181556 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.57 46.0 2.84e-01 97.6% 29.6%
4023510 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.57 43.0 2.86e-01 97.6% 27.7%
3926998 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.55 40.0 3.31e-01 80.5% 53.8%
3731599 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.55 44.0 2.78e-01 100.0% 76.4%
3689240 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.54 42.0 2.53e-01 85.4% 31.5%
3491126 3382.1.1.1 alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.53 43.0 2.57e-01 90.2% 27.3%
4635248 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.53 44.0 2.62e-01 100.0% 91.5%
3222225 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 41.0 3.60e-01 87.8% 89.2%
1499737 109.2.1.26 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_92 0.53 38.0 2.22e-01 78.0% 25.3%
3362766 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.52 39.0 3.70e-01 73.2% 68.0%
3696026 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.52 39.0 3.45e-01 80.5% 95.0%
3516364 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.52 35.0 3.57e-01 70.7% 95.0%
3655992 109.4.1.403 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Foie-gras_1 0.52 36.0 2.39e-01 80.5% 17.9%
4932654 284.4.1.1 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF 0.52 35.0 3.37e-01 73.2% 100.0%
4962327 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.51 38.0 3.54e-01 82.9% 100.0%