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MZ892988.1__UAW58967.1__CRP212_gp01__00001
Bact-VirMZ892988.1__UAW58967.1__CRP212_gp01__00001
Identity
- Accession:
- MZ892988 ↗
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-56
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gn4A02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.71 | 61.0 | 4.79e-01 | 100.0% | 54.8% |
| 3vx8A01 | 3.40.140.100 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 C-terminal domain | 0.70 | 59.0 | 4.41e-01 | 100.0% | 41.1% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.69 | 59.0 | 4.65e-01 | 100.0% | 47.8% |
| 3jtnB00 | 3.30.70.1950 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 52.0 | 4.45e-01 | 92.3% | 84.4% |
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.65 | 49.0 | 3.81e-01 | 80.8% | 80.2% |
| 1hqz800 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.64 | 52.0 | 4.07e-01 | 100.0% | 47.0% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.62 | 50.0 | 3.78e-01 | 96.2% | 82.9% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.62 | 51.0 | 3.84e-01 | 100.0% | 44.6% |
| 4jgpA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 42.0 | 3.44e-01 | 71.2% | 89.1% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.61 | 51.0 | 3.79e-01 | 100.0% | 45.4% |
| 1yqsA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.61 | 48.0 | 2.91e-01 | 86.5% | 70.7% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.60 | 49.0 | 3.88e-01 | 100.0% | 59.1% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 43.0 | 2.93e-01 | 88.5% | 21.9% |
| 3mq0B02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 43.0 | 3.05e-01 | 78.8% | 82.6% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 47.0 | 3.59e-01 | 90.4% | 54.3% |
| 2xfaA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.59 | 47.0 | 3.67e-01 | 100.0% | 48.3% |
| 1mkiA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 45.0 | 3.22e-01 | 86.5% | 35.5% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 45.0 | 3.44e-01 | 84.6% | 46.4% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 43.0 | 3.46e-01 | 80.8% | 96.2% |
| 1ou8A00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.58 | 39.0 | 3.25e-01 | 73.1% | 85.8% |
| 2d8bA01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.58 | 47.0 | 3.64e-01 | 100.0% | 52.1% |
| 4jn3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 43.0 | 2.87e-01 | 100.0% | 19.8% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.56 | 41.0 | 3.30e-01 | 78.8% | 76.0% |
| 1uyvA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 42.0 | 2.74e-01 | 84.6% | 26.7% |
| 6hj2A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 43.0 | 2.75e-01 | 86.5% | 85.0% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 39.0 | 2.67e-01 | 75.0% | 100.0% |
| 6genR01 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 42.0 | 3.68e-01 | 94.2% | 71.3% |
| 4qd4A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 44.0 | 2.74e-01 | 100.0% | 93.8% |
| 6iouA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 37.0 | 2.92e-01 | 90.4% | 33.9% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.53 | 46.0 | 3.37e-01 | 100.0% | 90.8% |
| 5fljA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 40.0 | 2.76e-01 | 80.8% | 29.7% |
| 2r6fA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 36.0 | 3.29e-01 | 71.2% | 87.5% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 43.0 | 3.55e-01 | 92.3% | 71.1% |
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.52 | 37.0 | 3.53e-01 | 71.2% | 72.1% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.52 | 46.0 | 3.76e-01 | 100.0% | 81.6% |
| 1hbxA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.52 | 41.0 | 3.74e-01 | 88.5% | 74.6% |
| 3h20A02 | 3.30.70.1790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain | 0.52 | 37.0 | 2.91e-01 | 80.8% | 37.9% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 42.0 | 3.59e-01 | 100.0% | 53.1% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.12e-01 | 73.1% | 82.5% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.43e-01 | 92.3% | 70.4% |
| 3liuA01 | 2.60.40.3160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.07e-01 | 86.5% | 60.2% |
| 3obfA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 39.0 | 2.86e-01 | 92.3% | 30.1% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4425813 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.74 | 63.0 | 4.93e-01 | 100.0% | 53.3% |
| 4010712 | 2492.1.1.31 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › DUF4329 | 0.74 | 60.0 | 4.51e-01 | 92.3% | 53.1% |
| 5046179 | 4160.1.1.1 ↗ | beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Peptidase_M29 | 0.71 | 56.0 | 3.64e-01 | 84.6% | 81.9% |
| 4959435 | 4160.1.1.3 ↗ | beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › PF26233 | 0.71 | 55.0 | 3.70e-01 | 84.6% | 88.1% |
| 3260834 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.70 | 59.0 | 4.69e-01 | 100.0% | 54.8% |
| 3591863 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.69 | 59.0 | 4.54e-01 | 100.0% | 43.2% |
| 3652139 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.67 | 55.0 | 4.22e-01 | 100.0% | 41.4% |
| 3616430 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.67 | 48.0 | 3.72e-01 | 76.9% | 65.0% |
| 4961612 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.67 | 47.0 | 3.18e-01 | 73.1% | 74.4% |
| 4241460 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.67 | 48.0 | 3.54e-01 | 76.9% | 45.2% |
| 3671478 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.66 | 56.0 | 4.51e-01 | 100.0% | 52.7% |
| 3969508 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 55.0 | 3.82e-01 | 94.2% | 55.9% |
| 4020837 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 47.0 | 3.70e-01 | 80.8% | 60.0% |
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 44.0 | 3.40e-01 | 73.1% | 68.8% |
| 3318217 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.64 | 47.0 | 4.06e-01 | 100.0% | 51.2% |
| 5007991 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.64 | 44.0 | 3.34e-01 | 73.1% | 75.4% |
| 4008377 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.64 | 45.0 | 3.55e-01 | 75.0% | 64.5% |
| 4976792 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.64 | 49.0 | 3.40e-01 | 84.6% | 25.1% |
| 4010167 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 44.0 | 2.91e-01 | 94.2% | 17.3% |
| 5057963 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.61 | 51.0 | 3.84e-01 | 100.0% | 56.6% |
| 4448380 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.61 | 49.0 | 3.88e-01 | 96.2% | 60.0% |
| 400603 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.60 | 50.0 | 3.88e-01 | 100.0% | 56.0% |
| 3838184 | 212.1.1.12 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › UPF0029 | 0.60 | 44.0 | 3.55e-01 | 86.5% | 72.0% |
| 3175102 | 2008.1.1.79 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pet127 | 0.60 | 44.0 | 2.67e-01 | 78.8% | 15.7% |
| 4544770 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.60 | 48.0 | 3.75e-01 | 100.0% | 54.3% |
| 1098285 | 223.6.1.1 ↗ | a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like | 0.59 | 46.0 | 3.41e-01 | 88.5% | 36.3% |
| 2042105 | 223.1.1.1 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PHY | 0.58 | 51.0 | 3.44e-01 | 100.0% | 88.2% |
| 3473990 | 223.1.1.98 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30670 | 0.58 | 41.0 | 2.83e-01 | 80.8% | 60.0% |
| 3278117 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.57 | 45.0 | 3.20e-01 | 88.5% | 35.8% |
| 2771755 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.56 | 48.0 | 3.46e-01 | 100.0% | 68.1% |
| 5000533 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 43.0 | 3.34e-01 | 82.7% | 56.0% |
| 3722550 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.55 | 44.0 | 2.87e-01 | 94.2% | 39.6% |
| 3408914 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.55 | 37.0 | 2.93e-01 | 100.0% | 29.2% |
| 3239006 | 223.1.1.69 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › VWA_N | 0.55 | 46.0 | 3.33e-01 | 100.0% | 76.9% |
| 3693544 | 2008.1.1.147 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29557 | 0.54 | 40.0 | 2.55e-01 | 98.1% | 13.7% |
| 4402757 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.54 | 44.0 | 3.32e-01 | 96.2% | 77.0% |
| 3954591 | 1075.1.2.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › DUF2567 | 0.54 | 48.0 | 3.38e-01 | 100.0% | 63.7% |
| 4033546 | 221.1.1.20 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › MAP | 0.54 | 39.0 | 3.24e-01 | 82.7% | 70.0% |
| 136189 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 45.0 | 3.26e-01 | 94.2% | 85.0% |
| 5011007 | 4.1.1.301 ↗ | beta barrels › SH3 › SH3 › SH3 › MJ1316 | 0.52 | 36.0 | 3.30e-01 | 100.0% | 52.7% |
| 3398695 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 41.0 | 2.83e-01 | 90.4% | 78.4% |
| 3918990 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 41.0 | 2.33e-01 | 100.0% | 46.9% |
| 3338842 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.52 | 40.0 | 2.43e-01 | 84.6% | 74.9% |
| 5060821 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 2.65e-01 | 73.1% | 76.6% |
| 3926581 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.51 | 43.0 | 3.48e-01 | 98.1% | 83.8% |
| 4665876 | 223.1.1.100 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF29910 | 0.51 | 43.0 | 3.03e-01 | 100.0% | 59.4% |
| 4136386 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 44.0 | 3.08e-01 | 98.1% | 56.5% |
| 3512723 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.51 | 41.0 | 2.74e-01 | 90.4% | 71.4% |
| 4424877 | 1.1.5.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C | 0.51 | 41.0 | 2.83e-01 | 88.5% | 72.6% |
| 4477966 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 43.0 | 3.22e-01 | 100.0% | 84.3% |