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MZ892988.1__UAW59019.1__CRP212_gp53__00053

Bact-Vir

MZ892988.1__UAW59019.1__CRP212_gp53__00053

Identity

Accession:
MZ892988 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-51
PDB
D2 medium residues 52-110
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cmlA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 47.0 3.17e-01 79.7% 82.5%
4q1vA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.64 57.0 3.39e-01 100.0% 15.4%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.63 45.0 4.30e-01 98.3% 63.9%
2d0bA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.61 43.0 3.83e-01 98.3% 50.6%
6sulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 53.0 4.36e-01 100.0% 92.6%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.60 42.0 3.83e-01 96.6% 55.7%
2z3zA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.59 50.0 3.08e-01 100.0% 19.3%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.59 47.0 4.76e-01 94.9% 91.4%
1cjaA01 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.59 44.0 3.35e-01 83.1% 67.3%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.59 52.0 3.87e-01 100.0% 53.3%
3kdgB01 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.58 43.0 3.65e-01 78.0% 87.1%
1orvA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.58 51.0 3.01e-01 100.0% 14.9%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.07e-01 100.0% 25.1%
4pavB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 40.0 3.19e-01 93.2% 33.6%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 3.00e-01 100.0% 21.4%
2hq4A00 3.40.1600.10 Alpha Beta › 3-Layer(aba) Sandwich › PH1570-like fold › PH1570-like 0.57 43.0 3.21e-01 83.1% 31.0%
4i93A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 44.0 3.78e-01 84.7% 90.5%
3kifD00 2.20.25.650 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like 0.56 42.0 3.68e-01 98.3% 52.7%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 46.0 4.08e-01 96.6% 72.5%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 47.0 3.39e-01 100.0% 75.0%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 48.0 3.04e-01 100.0% 23.0%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 45.0 3.94e-01 100.0% 70.1%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.78e-01 89.8% 82.8%
3g5oC00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.52 45.0 4.05e-01 100.0% 95.4%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 3.27e-01 100.0% 46.8%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.52 43.0 3.33e-01 93.2% 62.4%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 43.0 3.68e-01 100.0% 56.6%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.34e-01 93.2% 75.8%
1ou5A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 38.0 2.90e-01 79.7% 72.9%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.50e-01 91.5% 95.1%
2fi1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 40.0 3.99e-01 96.6% 90.6%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.51 42.0 3.74e-01 98.3% 86.8%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 31.0 3.11e-01 81.4% 54.8%
2gzaA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 39.0 3.26e-01 86.4% 90.7%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.50 39.0 3.43e-01 89.8% 96.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4519579 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.76 62.0 5.02e-01 91.5% 79.1%
5028816 2005.1.1.7 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.73 61.0 3.51e-01 93.2% 16.2%
4477987 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.71 56.0 5.06e-01 89.8% 100.0%
1033396 243.4.1.1 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N 0.70 52.0 4.87e-01 100.0% 64.0%
3165786 243.4.1.1 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N 0.70 51.0 4.94e-01 100.0% 70.8%
3679631 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.69 61.0 3.80e-01 100.0% 20.9%
4031431 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.68 48.0 4.64e-01 96.6% 66.2%
3416069 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.68 46.0 4.33e-01 98.3% 58.6%
4944418 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.68 47.0 4.37e-01 96.6% 57.3%
4942996 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.67 57.0 5.03e-01 98.3% 87.8%
4239781 3006.1.1.6 a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C 0.65 49.0 4.69e-01 98.3% 68.6%
3306543 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.65 46.0 4.35e-01 100.0% 62.9%
3785779 604.3.1.11 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.65 43.0 2.86e-01 100.0% 16.4%
4587271 9002.1.1.1 a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 0.64 46.0 4.85e-01 100.0% 94.0%
4029138 5.1.4.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD 0.64 58.0 3.56e-01 100.0% 19.1%
4201840 331.1.1.6 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.63 45.0 4.10e-01 98.3% 56.2%
4659650 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.63 44.0 3.95e-01 98.3% 50.0%
4937221 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.63 43.0 4.01e-01 96.6% 56.0%
1837476 331.1.1.6 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.63 45.0 4.40e-01 98.3% 68.7%
3483693 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 41.0 3.25e-01 98.3% 30.8%
4201476 310.1.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain 0.62 51.0 4.60e-01 94.9% 97.6%
3710489 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.62 45.0 3.68e-01 100.0% 42.9%
1199657 9002.1.1.1 a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 0.62 44.0 4.57e-01 100.0% 82.1%
3929071 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 54.0 4.26e-01 100.0% 64.8%
4867287 304.48.1.12 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Mononeg_RNA_pol 0.62 44.0 2.68e-01 74.6% 34.6%
3957482 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.61 50.0 5.20e-01 100.0% 100.0%
3537300 5.1.4.313 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.60 54.0 3.35e-01 100.0% 20.6%
5014721 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.60 43.0 3.71e-01 100.0% 47.4%
4679871 331.1.1.6 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.59 42.0 3.88e-01 98.3% 56.2%
2089781 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.59 48.0 4.24e-01 89.8% 75.0%
4948221 331.1.1.29 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Fer4_10 0.59 41.0 3.69e-01 100.0% 51.8%
5058484 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.59 40.0 3.82e-01 100.0% 60.0%
3445390 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.58 49.0 4.04e-01 98.3% 53.9%
3524259 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.58 40.0 2.81e-01 72.9% 22.7%
5045767 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 41.0 3.62e-01 100.0% 50.0%
4971751 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.57 42.0 3.37e-01 100.0% 38.3%
1680171 213.1.1.21 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.57 44.0 3.44e-01 83.1% 52.8%
3813497 4337.1.1.2 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › Mlh1_C 0.57 45.0 3.25e-01 84.7% 76.2%
3893040 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.57 36.0 3.96e-01 100.0% 84.4%
4991346 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.57 45.0 4.21e-01 88.1% 96.0%
3259281 207.1.1.129 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_ComC 0.57 49.0 3.01e-01 100.0% 24.6%
3262178 207.1.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 0.56 49.0 2.94e-01 100.0% 20.0%
5069568 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.56 40.0 3.55e-01 98.3% 50.0%
4011122 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 41.0 2.50e-01 78.0% 13.1%
3701133 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 46.0 3.18e-01 89.8% 86.4%
4998266 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.56 41.0 3.96e-01 96.6% 68.6%
3574641 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 48.0 3.34e-01 100.0% 29.4%
5007067 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.56 48.0 4.15e-01 94.9% 92.2%
3272249 376.1.1.6 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ 0.56 38.0 3.20e-01 71.2% 98.0%
3879259 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.56 50.0 3.40e-01 100.0% 36.1%
4946134 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.55 45.0 4.41e-01 91.5% 87.7%
3514663 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 42.0 4.02e-01 89.8% 81.3%
4967615 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 46.0 3.32e-01 100.0% 85.5%
3879656 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.53 37.0 2.67e-01 72.9% 23.8%
3419120 59.1.4.1 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.53 45.0 3.44e-01 100.0% 59.4%
3644493 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 42.0 2.65e-01 96.6% 39.1%
3777607 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.53 42.0 3.05e-01 89.8% 92.4%
3911662 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.51 41.0 2.90e-01 91.5% 89.8%
3494398 4337.1.1.2 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › Mlh1_C 0.51 42.0 3.21e-01 98.3% 37.0%
5051713 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.51 42.0 3.33e-01 100.0% 55.9%
3243949 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.51 38.0 3.86e-01 86.4% 83.3%