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MZ892989.1__UAW59081.1__CRP235_gp56__00056
Bact-VirMZ892989.1__UAW59081.1__CRP235_gp56__00056
Identity
- Accession:
- MZ892989 ↗
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-109
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.80 | 48.0 | 3.93e-01 | 93.2% | 34.8% |
| 2k7iA01 | 3.30.160.160 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like | 0.67 | 31.0 | 4.10e-01 | 75.0% | 81.2% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.62 | 47.0 | 3.73e-01 | 80.7% | 91.2% |
| 1iyxA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 41.0 | 3.67e-01 | 80.7% | 48.0% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.58 | 39.0 | 3.25e-01 | 76.1% | 39.0% |
| 3n54B01 | 6.20.190.10 | Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 | 0.57 | 34.0 | 3.99e-01 | 76.1% | 86.9% |
| 4ckmB00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.57 | 38.0 | 3.25e-01 | 76.1% | 41.7% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.57 | 39.0 | 3.40e-01 | 77.3% | 46.3% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 45.0 | 3.20e-01 | 94.3% | 82.8% |
| 7zqiA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 42.0 | 3.41e-01 | 90.9% | 95.5% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 39.0 | 2.75e-01 | 81.8% | 42.0% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 43.0 | 3.79e-01 | 93.2% | 63.0% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.51 | 45.0 | 3.51e-01 | 97.7% | 72.5% |
| 1jkmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 37.0 | 2.44e-01 | 76.1% | 55.0% |
| 3jvvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 31.0 | 3.04e-01 | 93.2% | 54.0% |
| 1dfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 36.0 | 2.95e-01 | 84.1% | 38.7% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.50 | 41.0 | 2.94e-01 | 90.9% | 84.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3443030 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 37.0 | 3.91e-01 | 71.6% | 58.7% |
| 5034195 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.65 | 37.0 | 4.50e-01 | 75.0% | 89.1% |
| 5019856 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.64 | 39.0 | 4.04e-01 | 77.3% | 63.5% |
| 4957167 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.63 | 36.0 | 2.57e-01 | 70.5% | 20.4% |
| 3612666 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 34.0 | 2.98e-01 | 71.6% | 36.2% |
| 4024069 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.60 | 39.0 | 3.24e-01 | 76.1% | 36.3% |
| 4528584 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.60 | 39.0 | 3.18e-01 | 76.1% | 34.1% |
| 4304407 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.60 | 34.0 | 2.91e-01 | 71.6% | 35.6% |
| 3936392 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.59 | 38.0 | 3.18e-01 | 76.1% | 36.8% |
| 4483827 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.59 | 39.0 | 3.27e-01 | 76.1% | 38.7% |
| 3806681 | 5.1.5.96 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 | 0.58 | 40.0 | 2.81e-01 | 71.6% | 28.4% |
| 3594523 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.57 | 38.0 | 3.23e-01 | 76.1% | 40.0% |
| 3611119 | 719.1.1.4 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › SAS-6_N | 0.57 | 38.0 | 3.35e-01 | 76.1% | 44.4% |
| 3710444 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.57 | 38.0 | 3.16e-01 | 76.1% | 37.5% |
| 3717097 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 44.0 | 2.76e-01 | 84.1% | 52.7% |
| None | — | 0.57 | 38.0 | 3.19e-01 | 76.1% | 38.7% | |
| 3180376 | 109.3.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 | 0.56 | 41.0 | 2.69e-01 | 80.7% | 20.0% |
| 3781935 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 42.0 | 3.72e-01 | 81.8% | 71.2% |
| 5053329 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 43.0 | 3.87e-01 | 84.1% | 80.8% |
| 3560129 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 38.0 | 3.39e-01 | 84.1% | 51.2% |
| 3688082 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 34.0 | 2.86e-01 | 72.7% | 38.0% |
| 5004718 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 36.0 | 3.09e-01 | 72.7% | 63.2% |
| 3641525 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.52 | 43.0 | 3.32e-01 | 88.6% | 68.1% |
| 3701911 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.52 | 44.0 | 3.23e-01 | 90.9% | 79.1% |
| 3940807 | 101.1.2.194 ↗ | alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH | 0.51 | 35.0 | 3.03e-01 | 70.5% | 69.3% |
| 3247792 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 38.0 | 3.50e-01 | 86.4% | 60.0% |