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MZ892990.1__UAW59100.1__CRP345_gp14__00014
Bact-VirMZ892990.1__UAW59100.1__CRP345_gp14__00014
Identity
- Accession:
- MZ892990 ↗
- Kingdom:
- phage
Quality
74.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-44
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.67 | 57.0 | 5.39e-01 | 100.0% | 83.6% |
| 1k7cA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.67 | 47.0 | 2.97e-01 | 75.0% | 84.1% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.65 | 51.0 | 4.65e-01 | 90.9% | 66.1% |
| 4lmoA00 | 1.10.132.70 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.64 | 52.0 | 3.32e-01 | 95.5% | 62.9% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.64 | 43.0 | 3.24e-01 | 70.5% | 65.7% |
| 1t6sB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 35.0 | 2.87e-01 | 79.5% | 28.6% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.61 | 45.0 | 4.09e-01 | 88.6% | 84.3% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 42.0 | 3.45e-01 | 70.5% | 78.8% |
| 3i3vB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 35.0 | 2.35e-01 | 93.2% | 14.8% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.59 | 45.0 | 3.33e-01 | 88.6% | 54.7% |
| 4a5pB01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.57 | 40.0 | 2.91e-01 | 75.0% | 43.2% |
| 2iybE00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.56 | 46.0 | 4.18e-01 | 97.7% | 87.5% |
| 7sbeA01 | 1.10.132.70 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.56 | 43.0 | 2.87e-01 | 95.5% | 67.7% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 35.0 | 3.90e-01 | 72.7% | 85.3% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.55 | 37.0 | 3.50e-01 | 72.7% | 71.9% |
| 1yuiA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 38.0 | 3.70e-01 | 81.8% | 64.8% |
| 3fv6A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 42.0 | 2.93e-01 | 88.6% | 89.0% |
| 5yk4A04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.52 | 41.0 | 3.00e-01 | 93.2% | 33.8% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 43.0 | 3.36e-01 | 100.0% | 70.8% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3607251 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.82 | 60.0 | 6.49e-01 | 84.1% | 100.0% |
| 3582405 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 68.0 | 5.90e-01 | 100.0% | 64.3% |
| 3494052 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 62.0 | 6.22e-01 | 90.9% | 86.7% |
| 3929512 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.77 | 62.0 | 5.64e-01 | 90.9% | 66.7% |
| 3232605 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.76 | 56.0 | 6.16e-01 | 79.5% | 100.0% |
| 4959094 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.75 | 60.0 | 5.62e-01 | 90.9% | 70.9% |
| 3206107 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.75 | 55.0 | 5.96e-01 | 93.2% | 100.0% |
| 3394910 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 54.0 | 5.90e-01 | 79.5% | 100.0% |
| 3648914 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 59.0 | 5.73e-01 | 90.9% | 96.0% |
| 4977157 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.72 | 57.0 | 5.73e-01 | 90.9% | 86.7% |
| 5033522 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 63.0 | 6.07e-01 | 100.0% | 90.0% |
| 3271906 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.71 | 61.0 | 5.58e-01 | 100.0% | 78.0% |
| 2875038 | 3993.1.1.1 ↗ | few secondary structure elements › C-P lyase subunit PhnJ C-terminal Zn-binding domain › C-P lyase subunit PhnJ C-terminal Zn-binding domain › C-P lyase subunit PhnJ C-terminal Zn-binding domain › PhnJ | 0.69 | 47.0 | 4.73e-01 | 72.7% | 69.6% |
| 3528204 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.69 | 51.0 | 5.27e-01 | 86.4% | 90.0% |
| 3408969 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.68 | 52.0 | 4.49e-01 | 88.6% | 52.9% |
| 4670436 | 375.1.1.284 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27208 | 0.67 | 49.0 | 5.09e-01 | 88.6% | 95.0% |
| 3908093 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.67 | 52.0 | 5.19e-01 | 88.6% | 84.4% |
| 4026105 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 53.0 | 4.56e-01 | 100.0% | 97.5% |
| 3566649 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.65 | 49.0 | 4.96e-01 | 90.9% | 82.2% |
| 4943801 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 47.0 | 4.89e-01 | 84.1% | 87.5% |
| 3416712 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.64 | 47.0 | 4.85e-01 | 86.4% | 87.5% |
| 3258891 | 4961.1.1.2 ↗ | a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpa2_4 | 0.64 | 51.0 | 3.90e-01 | 93.2% | 40.9% |
| 3689756 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 55.0 | 3.83e-01 | 97.7% | 32.4% |
| 3426696 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 48.0 | 4.86e-01 | 90.9% | 93.0% |
| 4989893 | 601.7.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › HEPN domain in CRISPR-associated protein Csx1 | 0.63 | 37.0 | 2.50e-01 | 70.5% | 16.0% |
| 3224677 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 45.0 | 4.24e-01 | 88.6% | 65.0% |
| 3905663 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.60 | 46.0 | 4.19e-01 | 95.5% | 61.4% |
| 3331318 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.59 | 46.0 | 4.22e-01 | 93.2% | 64.6% |
| 3172042 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.58 | 48.0 | 4.27e-01 | 100.0% | 65.7% |
| 3555106 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.57 | 44.0 | 2.71e-01 | 88.6% | 23.5% |
| 3838041 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.57 | 42.0 | 2.69e-01 | 88.6% | 26.3% |
| 3698504 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.57 | 44.0 | 2.69e-01 | 88.6% | 23.2% |
| 3599103 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.57 | 44.0 | 2.68e-01 | 88.6% | 21.5% |
| 3926287 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.55 | 42.0 | 2.55e-01 | 88.6% | 20.3% |
| 3264636 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.55 | 42.0 | 2.55e-01 | 88.6% | 22.4% |
| 3617695 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.53 | 41.0 | 2.48e-01 | 88.6% | 20.0% |
| 3258549 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.53 | 39.0 | 2.43e-01 | 88.6% | 21.2% |
| 2721320 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.53 | 35.0 | 3.51e-01 | 72.7% | 66.7% |
| 3789678 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.53 | 40.0 | 2.45e-01 | 88.6% | 20.6% |
| 3682992 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.53 | 38.0 | 2.43e-01 | 88.6% | 22.3% |
| 3959587 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.51 | 36.0 | 2.66e-01 | 70.5% | 89.2% |
| 3608730 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.51 | 40.0 | 2.41e-01 | 88.6% | 85.2% |
| 1518814 | 7523.1.1.23 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 | 0.50 | 37.0 | 2.65e-01 | 100.0% | 76.3% |