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MZ892993.1__UAW59320.1__HTVC033P_gp11__00011
Bact-VirMZ892993.1__UAW59320.1__HTVC033P_gp11__00011
Identity
- Accession:
- MZ892993 ↗
- Kingdom:
- phage
Quality
95.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-61
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 3.92e-01 | 96.2% | 94.7% |
| 1mpxA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.51 | 38.0 | 3.56e-01 | 82.7% | 88.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968795 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.53 | 42.0 | 2.74e-01 | 92.3% | 58.5% |
| 4148999 | 4132.1.1.1 ↗ | alpha bundles › IpaD-like › IpaD-like › IpaD-like › T3SS_TC | 0.53 | 39.0 | 2.52e-01 | 82.7% | 45.9% |
| 3964295 | 230.4.1.1 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE | 0.52 | 37.0 | 3.12e-01 | 96.2% | 43.3% |
D2
high
residues 71-134
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 50.0 | 3.91e-01 | 84.4% | 35.7% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 42.0 | 4.21e-01 | 82.8% | 67.2% |
| 3bkrA00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.57 | 41.0 | 3.38e-01 | 90.6% | 41.2% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 39.0 | 3.80e-01 | 85.9% | 63.0% |
| 8axiA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 38.0 | 2.45e-01 | 73.4% | 43.5% |
| 5tdeA01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 45.0 | 3.49e-01 | 92.2% | 58.4% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 41.0 | 2.85e-01 | 82.8% | 63.8% |
| 3licA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 3.37e-01 | 96.9% | 56.2% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 41.0 | 2.81e-01 | 82.8% | 63.7% |
| 5jeaD00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.54 | 37.0 | 2.65e-01 | 73.4% | 99.1% |
| 4pphA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.54 | 44.0 | 3.32e-01 | 100.0% | 78.5% |
| 4yfbC01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 40.0 | 2.67e-01 | 81.2% | 70.4% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.54 | 35.0 | 3.11e-01 | 92.2% | 40.6% |
| 3kh8A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 34.0 | 2.75e-01 | 75.0% | 30.8% |
| 1v73A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 40.0 | 2.58e-01 | 82.8% | 36.3% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 44.0 | 4.19e-01 | 100.0% | 94.9% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 2.82e-01 | 96.9% | 20.9% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.53 | 40.0 | 3.38e-01 | 87.5% | 45.3% |
| 4bthB01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 39.0 | 2.65e-01 | 81.2% | 70.4% |
| 1xm8A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 40.0 | 2.79e-01 | 87.5% | 95.7% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 39.0 | 4.01e-01 | 95.3% | 86.9% |
| 2hzmA02 | 2.20.140.20 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › | 0.52 | 42.0 | 3.88e-01 | 89.1% | 76.5% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 39.0 | 3.59e-01 | 84.4% | 72.5% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.52 | 41.0 | 3.00e-01 | 87.5% | 92.3% |
| 1milA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 41.0 | 3.67e-01 | 95.3% | 64.4% |
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 37.0 | 3.89e-01 | 93.8% | 84.7% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 3.34e-01 | 84.4% | 56.3% |
| 2g2qB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 42.0 | 3.59e-01 | 95.3% | 100.0% |
| 4c8bA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 39.0 | 2.74e-01 | 92.2% | 29.0% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.42e-01 | 95.3% | 69.8% |
| 4qdgA02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.41e-01 | 98.4% | 79.3% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.49e-01 | 87.5% | 100.0% |
| 1r8nA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 36.0 | 2.61e-01 | 75.0% | 30.8% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4069988 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.75 | 49.0 | 3.90e-01 | 84.4% | 34.4% |
| 4678702 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.74 | 49.0 | 3.90e-01 | 85.9% | 35.2% |
| 3309291 | 7515.1.1.2 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase | 0.72 | 47.0 | 2.86e-01 | 78.1% | 10.5% |
| 3828070 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.71 | 41.0 | 4.45e-01 | 98.4% | 67.3% |
| 3335974 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.70 | 49.0 | 3.77e-01 | 89.1% | 33.6% |
| 4285702 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 43.0 | 3.66e-01 | 98.4% | 41.0% |
| 3499345 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.65 | 45.0 | 4.15e-01 | 73.4% | 74.1% |
| 3702281 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.65 | 44.0 | 4.64e-01 | 78.1% | 81.8% |
| 3541856 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.64 | 45.0 | 3.44e-01 | 73.4% | 78.6% |
| 3643744 | 5.1.4.122 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 | 0.64 | 45.0 | 2.90e-01 | 73.4% | 35.9% |
| 3929548 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.61 | 47.0 | 3.75e-01 | 90.6% | 39.6% |
| 3207612 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.61 | 45.0 | 3.13e-01 | 76.6% | 26.8% |
| 136515 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.60 | 42.0 | 4.11e-01 | 78.1% | 67.6% |
| 3907024 | 260.1.1.1 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin | 0.60 | 54.0 | 3.40e-01 | 100.0% | 19.7% |
| 3837575 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.60 | 52.0 | 3.24e-01 | 98.4% | 85.5% |
| 4959887 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.60 | 38.0 | 3.77e-01 | 98.4% | 60.0% |
| 3431397 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.59 | 52.0 | 3.26e-01 | 98.4% | 26.5% |
| 3426675 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.59 | 38.0 | 3.96e-01 | 98.4% | 69.5% |
| 3787213 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.59 | 47.0 | 3.92e-01 | 100.0% | 49.6% |
| 3656396 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.59 | 43.0 | 3.26e-01 | 79.7% | 100.0% |
| 3436240 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.58 | 47.0 | 3.06e-01 | 90.6% | 98.1% |
| 4223372 | 247.1.1.5 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,HAGH_C | 0.58 | 41.0 | 2.86e-01 | 78.1% | 83.1% |
| 3353680 | 247.1.1.5 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,HAGH_C | 0.57 | 42.0 | 2.89e-01 | 81.2% | 81.1% |
| 4526428 | 247.1.1.5 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,HAGH_C | 0.57 | 40.0 | 2.80e-01 | 78.1% | 82.7% |
| 3606532 | 2484.6.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR | 0.56 | 39.0 | 3.52e-01 | 98.4% | 52.2% |
| 2439625 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.55 | 40.0 | 3.54e-01 | 76.6% | 50.0% |
| None | — | 0.55 | 45.0 | 3.02e-01 | 100.0% | 44.0% | |
| 3841986 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 43.0 | 2.80e-01 | 85.9% | 97.2% |
| 3504015 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 41.0 | 3.83e-01 | 98.4% | 63.5% |
| 3801966 | 252.1.1.2 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › DUF7028 | 0.55 | 34.0 | 3.33e-01 | 96.9% | 53.3% |
| 166902 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.55 | 41.0 | 2.85e-01 | 82.8% | 63.8% |
| 3932703 | 11.2.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_GDE1 | 0.54 | 37.0 | 3.32e-01 | 71.9% | 72.3% |
| 3797707 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 38.0 | 3.07e-01 | 92.2% | 36.3% |
| 4869677 | 4967.1.1.30 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › RVT_connect | 0.54 | 37.0 | 4.06e-01 | 79.7% | 96.0% |
| 4137634 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 40.0 | 3.53e-01 | 87.5% | 53.7% |
| 3615642 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.53 | 39.0 | 3.89e-01 | 96.9% | 78.5% |
| 3269772 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 41.0 | 2.48e-01 | 82.8% | 18.2% |
| 3506715 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.52 | 42.0 | 3.25e-01 | 90.6% | 74.8% |
| 3822901 | 5.1.3.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2 | 0.52 | 43.0 | 2.85e-01 | 100.0% | 47.7% |
| 3783916 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 35.0 | 3.76e-01 | 93.8% | 83.6% |
| 3506170 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 41.0 | 3.05e-01 | 89.1% | 44.1% |
| None | — | 0.51 | 42.0 | 2.95e-01 | 98.4% | 30.8% | |
| 3479661 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 37.0 | 3.23e-01 | 100.0% | 46.4% |
| 3254787 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 39.0 | 3.18e-01 | 87.5% | 40.7% |
| 3874787 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 31.0 | 3.44e-01 | 92.2% | 92.5% |
| 3682520 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.51 | 41.0 | 2.62e-01 | 95.3% | 28.1% |
| 3641229 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.51 | 41.0 | 3.14e-01 | 100.0% | 58.4% |
| 3260369 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 32.0 | 3.53e-01 | 78.1% | 91.1% |
| 4188283 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.50 | 42.0 | 4.02e-01 | 98.4% | 86.3% |