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MZ892993.1__UAW59328.1__HTVC033P_gp19__00019
Bact-VirMZ892993.1__UAW59328.1__HTVC033P_gp19__00019
Identity
- Accession:
- MZ892993 ↗
- Kingdom:
- phage
Quality
95.1
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-62
Domain cluster:
rep: MN698239.1__QGZ17638.1__HTVC023P_gp09__00009__D2-60
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.77 | 47.0 | 4.33e-01 | 100.0% | 48.7% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.69 | 46.0 | 3.71e-01 | 100.0% | 36.3% |
| 4trtA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.69 | 49.0 | 3.85e-01 | 100.0% | 37.5% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 47.0 | 4.12e-01 | 100.0% | 49.4% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.68 | 47.0 | 3.36e-01 | 100.0% | 24.7% |
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.68 | 46.0 | 3.73e-01 | 100.0% | 36.1% |
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.67 | 49.0 | 3.79e-01 | 100.0% | 36.2% |
| 6lp4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 47.0 | 3.81e-01 | 78.7% | 74.0% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.65 | 46.0 | 4.08e-01 | 75.4% | 87.8% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.62 | 44.0 | 4.35e-01 | 100.0% | 69.7% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 49.0 | 4.65e-01 | 100.0% | 73.7% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.61 | 46.0 | 4.59e-01 | 100.0% | 81.0% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.59 | 45.0 | 2.98e-01 | 100.0% | 20.4% |
| 5fmgG00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.57 | 44.0 | 3.02e-01 | 83.6% | 46.1% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 42.0 | 3.67e-01 | 100.0% | 53.3% |
| 4xotA03 | 2.40.30.250 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 39.0 | 3.51e-01 | 73.8% | 75.6% |
| 1rypD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.56 | 41.0 | 2.76e-01 | 78.7% | 78.8% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 47.0 | 3.12e-01 | 98.4% | 98.9% |
| 1rypK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 43.0 | 3.05e-01 | 85.2% | 52.0% |
| 3tesA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.29e-01 | 100.0% | 45.7% |
| 5fmgF00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 41.0 | 2.87e-01 | 83.6% | 45.2% |
| 6qm7A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 39.0 | 2.66e-01 | 78.7% | 79.9% |
| 2vfkA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.54 | 44.0 | 3.20e-01 | 98.4% | 88.8% |
| 1wojA00 | 3.90.1740.10 | Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily | 0.54 | 41.0 | 2.95e-01 | 88.5% | 77.0% |
| 6qm7K00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 44.0 | 3.10e-01 | 95.1% | 78.2% |
| 6muwK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 44.0 | 3.13e-01 | 93.4% | 91.8% |
| 2hw4A01 | 3.50.20.20 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus | 0.53 | 38.0 | 3.30e-01 | 100.0% | 45.5% |
| 1rypC00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 42.0 | 2.86e-01 | 90.2% | 74.2% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.22e-01 | 100.0% | 36.7% |
| 7lxuE01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 43.0 | 2.94e-01 | 90.2% | 82.7% |
| 3t8qB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 43.0 | 3.58e-01 | 95.1% | 84.3% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 46.0 | 4.09e-01 | 100.0% | 92.0% |
| 1auvA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 41.0 | 3.39e-01 | 100.0% | 49.5% |
| 1g0uE00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 43.0 | 2.94e-01 | 95.1% | 68.7% |
| 1vs0A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 41.0 | 3.41e-01 | 88.5% | 63.6% |
| 8f66A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 42.0 | 2.90e-01 | 90.2% | 84.3% |
| 2gaiA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.51 | 44.0 | 3.54e-01 | 100.0% | 88.6% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050551 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.75 | 65.0 | 4.95e-01 | 100.0% | 96.7% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 48.0 | 5.23e-01 | 100.0% | 92.0% |
| 3968768 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 58.0 | 5.39e-01 | 100.0% | 97.3% |
| 4992059 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.64 | 48.0 | 3.82e-01 | 100.0% | 40.7% |
| 2392831 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.63 | 48.0 | 3.75e-01 | 100.0% | 39.4% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.63 | 52.0 | 4.34e-01 | 100.0% | 53.3% |
| 3598259 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.63 | 50.0 | 3.85e-01 | 100.0% | 39.3% |
| 4964337 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.61 | 45.0 | 4.66e-01 | 100.0% | 87.3% |
| 5037345 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.61 | 48.0 | 3.74e-01 | 100.0% | 39.8% |
| 3715457 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.60 | 53.0 | 3.97e-01 | 100.0% | 44.7% |
| 4672450 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.60 | 44.0 | 3.09e-01 | 80.3% | 88.8% |
| 3412152 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.59 | 48.0 | 3.69e-01 | 100.0% | 40.0% |
| 4969896 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.58 | 45.0 | 3.11e-01 | 100.0% | 24.8% |
| 3213055 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.58 | 50.0 | 3.17e-01 | 100.0% | 69.1% |
| 3805925 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.56 | 49.0 | 3.13e-01 | 100.0% | 96.9% |
| 3940587 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.56 | 50.0 | 3.18e-01 | 100.0% | 77.4% |
| 4223132 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.56 | 43.0 | 3.07e-01 | 85.2% | 48.0% |
| 3939460 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.56 | 49.0 | 3.10e-01 | 100.0% | 83.6% |
| 3629263 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.56 | 43.0 | 3.06e-01 | 85.2% | 50.5% |
| 3193266 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.56 | 48.0 | 3.58e-01 | 100.0% | 39.3% |
| 3169030 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.56 | 49.0 | 2.93e-01 | 100.0% | 81.3% |
| 4527505 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 49.0 | 2.98e-01 | 100.0% | 83.5% |
| 4017595 | 306.10.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › PF28980 | 0.55 | 49.0 | 3.90e-01 | 100.0% | 96.8% |
| 3563061 | 2485.1.1.43 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 | 0.55 | 39.0 | 2.91e-01 | 75.4% | 30.0% |
| 2980428 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.55 | 46.0 | 3.12e-01 | 93.4% | 30.5% |
| 4974768 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.55 | 48.0 | 3.10e-01 | 100.0% | 82.1% |
| 2980434 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.55 | 42.0 | 3.01e-01 | 85.2% | 49.7% |
| 3261503 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.55 | 46.0 | 3.11e-01 | 93.4% | 70.0% |
| 4240702 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 48.0 | 2.90e-01 | 100.0% | 82.9% |
| 3807776 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.54 | 47.0 | 3.01e-01 | 100.0% | 97.8% |
| 3565925 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 48.0 | 3.08e-01 | 100.0% | 88.8% |
| 2521302 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.54 | 44.0 | 3.10e-01 | 90.2% | 91.3% |
| 3455348 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.54 | 39.0 | 3.38e-01 | 78.7% | 92.0% |
| 3932752 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.54 | 40.0 | 3.27e-01 | 100.0% | 40.8% |
| 3823661 | 5.1.5.96 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 | 0.53 | 45.0 | 2.96e-01 | 100.0% | 98.3% |
| 4375016 | 210.1.1.2 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N | 0.53 | 39.0 | 2.62e-01 | 78.7% | 76.1% |
| 3395915 | 302.1.1.3 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › PF29551 | 0.53 | 45.0 | 3.35e-01 | 100.0% | 41.1% |
| 5458 | 4114.1.1.2 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › Ocnus | 0.53 | 38.0 | 3.30e-01 | 100.0% | 45.5% |
| 5036959 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.53 | 38.0 | 2.74e-01 | 77.0% | 48.3% |
| 3662110 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.51 | 41.0 | 2.84e-01 | 88.5% | 87.6% |
| 3700773 | 7520.1.1.0 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like | 0.50 | 39.0 | 2.87e-01 | 86.9% | 72.2% |
| 4610848 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.50 | 43.0 | 3.00e-01 | 96.7% | 82.8% |
| 3179520 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.50 | 42.0 | 2.83e-01 | 95.1% | 71.4% |
| 3853151 | 2485.1.1.94 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DJC16_C | 0.50 | 36.0 | 2.85e-01 | 80.3% | 46.7% |