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MZ911962.1__WNV45406.1__X__00004
Bact-VirMZ911962.1__WNV45406.1__X__00004
Identity
- Accession:
- MZ911962 ↗
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Taxonomy
TaxID: 3073016
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-66
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.65 | 51.0 | 3.64e-01 | 85.9% | 93.4% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 54.0 | 4.06e-01 | 93.8% | 53.5% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 52.0 | 3.90e-01 | 92.2% | 54.0% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 46.0 | 2.91e-01 | 81.2% | 84.9% |
| 3mcaB01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.61 | 45.0 | 3.92e-01 | 95.3% | 52.1% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.59 | 49.0 | 3.45e-01 | 93.8% | 52.2% |
| 3aapA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 40.0 | 3.23e-01 | 71.9% | 81.6% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 34.0 | 2.71e-01 | 71.9% | 29.9% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 43.0 | 3.70e-01 | 90.6% | 81.2% |
| 1njhA00 | 2.70.180.10 | Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF | 0.52 | 41.0 | 3.59e-01 | 90.6% | 55.6% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.52 | 35.0 | 3.89e-01 | 90.6% | 97.8% |
| 3d4rB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 43.0 | 4.27e-01 | 92.2% | 86.8% |
| 3bgtA01 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.51 | 35.0 | 2.53e-01 | 73.4% | 96.1% |
| 1xe4A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 29.0 | 2.20e-01 | 82.8% | 18.3% |
| 1f8nA01 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.51 | 39.0 | 3.18e-01 | 90.6% | 43.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 59.0 | 5.18e-01 | 90.6% | 54.7% |
| 3964308 | 1.1.13.37 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2163 | 0.78 | 66.0 | 5.10e-01 | 92.2% | 46.7% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.77 | 66.0 | 5.91e-01 | 92.2% | 72.1% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.77 | 65.0 | 5.31e-01 | 90.6% | 56.4% |
| 4970388 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 49.0 | 4.66e-01 | 89.1% | 58.7% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.73 | 65.0 | 5.18e-01 | 98.4% | 62.1% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 61.0 | 5.57e-01 | 100.0% | 69.4% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 60.0 | 5.08e-01 | 89.1% | 62.7% |
| 1187234 | 2484.1.1.15 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 | 0.58 | 40.0 | 3.14e-01 | 73.4% | 67.8% |
| 4052296 | 4.1.1.241 ↗ | beta barrels › SH3 › SH3 › SH3 › NifZ | 0.57 | 49.0 | 4.92e-01 | 93.8% | 96.9% |
| 4204046 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.55 | 47.0 | 3.84e-01 | 95.3% | 60.8% |
| 5050324 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.55 | 44.0 | 2.84e-01 | 90.6% | 39.7% |
| 4335497 | 76.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Endotoxin_M | 0.54 | 46.0 | 3.23e-01 | 96.9% | 64.5% |
| 4883709 | 4032.1.1.0 ↗ | beta complex topology › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin | 0.54 | 35.0 | 3.78e-01 | 92.2% | 82.7% |
| 3586385 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 4.33e-01 | 89.1% | 96.4% |
| 3602252 | 325.1.7.7 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › DUF2118 | 0.52 | 46.0 | 4.35e-01 | 100.0% | 81.0% |
| 3576119 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 37.0 | 2.91e-01 | 79.7% | 94.5% |
| 3233094 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.51 | 30.0 | 2.72e-01 | 90.6% | 42.2% |