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MZ923504.1__UIU47064.1__X__00050

Bact-Vir

MZ923504.1__UIU47064.1__X__00050

Identity

Accession:
MZ923504 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microcystis_phage_MinS1

TaxID: 2910156

Cluster

View cluster (74 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-50_69-168
PDB
Domain cluster: rep: pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00028__D17-130
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF25595.2 best Phage_TTP_16 63.4 3.30e-17 73.6% 54.5%
PF25595.2 Phage_TTP_16 39.4 7.90e-10 29.3% 22.8%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.72 49.0 4.83e-01 100.0% 65.3%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 52.0 5.16e-01 97.9% 79.2%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 52.0 5.16e-01 99.3% 82.3%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.62 36.0 4.11e-01 82.1% 76.0%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.62 42.0 4.47e-01 95.7% 77.6%
2qckA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 51.0 5.03e-01 99.3% 80.8%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 53.0 5.05e-01 99.3% 77.4%
2aneH00 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.62 41.0 4.58e-01 96.4% 87.2%
1yoaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 52.0 5.01e-01 99.3% 79.2%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 48.0 4.99e-01 100.0% 87.2%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.61 40.0 4.69e-01 92.9% 96.8%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 52.0 4.83e-01 99.3% 76.2%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 54.0 4.92e-01 99.3% 76.0%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 49.0 4.95e-01 98.6% 92.7%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.54 49.0 4.73e-01 99.3% 87.5%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 27.0 3.21e-01 77.9% 74.5%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002750 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 53.0 6.00e-01 92.9% 97.1%
5079927 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 39.0 4.76e-01 84.3% 82.2%
5082881 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 60.0 6.31e-01 97.9% 99.2%
2674670 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.68 60.0 5.62e-01 100.0% 76.2%
4140243 1.1.5.82 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 0.68 50.0 5.49e-01 98.6% 92.2%
2595159 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.67 61.0 5.70e-01 100.0% 80.7%
3967003 1.1.13.35 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_11 0.67 59.0 5.97e-01 98.6% 94.3%
4982501 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 37.0 4.32e-01 100.0% 76.8%
4036849 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.66 46.0 4.71e-01 97.9% 73.7%
5026244 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 38.0 4.67e-01 85.0% 88.9%
4952364 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.66 34.0 4.16e-01 82.9% 78.8%
4888726 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.66 60.0 5.66e-01 100.0% 82.9%
4538400 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.65 45.0 4.68e-01 97.9% 76.2%
3941988 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.64 49.0 5.32e-01 95.7% 97.4%
4608778 1.1.7.107 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.64 39.0 4.24e-01 85.0% 70.8%
5056723 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 38.0 4.46e-01 83.6% 86.3%
3948350 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.62 43.0 4.96e-01 95.7% 100.0%
5067070 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.62 53.0 5.39e-01 99.3% 90.7%
3974369 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.62 38.0 4.64e-01 95.7% 100.0%
5032025 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 39.0 4.41e-01 85.7% 85.7%
4992907 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.61 52.0 5.00e-01 99.3% 81.3%
2101663 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.61 54.0 5.17e-01 96.4% 87.1%
3696371 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.60 56.0 4.68e-01 99.3% 63.6%
3535347 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 43.0 4.67e-01 94.3% 89.6%
4980234 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 50.0 4.58e-01 98.6% 67.8%
2832216 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.60 54.0 5.31e-01 99.3% 92.8%
3249705 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 32.0 3.84e-01 80.0% 78.9%
4577588 1.1.9.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.59 40.0 4.10e-01 96.4% 70.4%
4988254 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.59 50.0 4.61e-01 99.3% 70.6%
4096792 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.59 54.0 4.73e-01 99.3% 69.3%
3909822 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 41.0 4.51e-01 82.9% 90.9%
3183073 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.58 53.0 4.27e-01 99.3% 52.2%
4270573 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.58 33.0 3.72e-01 94.3% 70.9%
4656128 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.58 54.0 4.82e-01 99.3% 75.8%
4018682 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.58 54.0 4.65e-01 100.0% 73.7%
3859218 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 31.0 3.34e-01 72.1% 59.2%
5003311 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.55 41.0 4.52e-01 96.4% 97.3%
4968263 1.1.5.91 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C 0.55 50.0 4.27e-01 98.6% 64.1%
4525377 3112.1.1.1 ↗ beta barrels › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › YabP 0.54 26.0 3.51e-01 76.4% 91.2%
4072524 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.53 39.0 4.33e-01 84.3% 96.4%
5018418 1.1.9.50 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF28530 0.52 42.0 4.08e-01 95.7% 77.5%
4026033 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.51 34.0 3.84e-01 82.9% 87.3%
4214302 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.51 44.0 3.79e-01 94.3% 77.3%
4238046 3112.1.1.1 ↗ beta barrels › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › YabP 0.51 24.0 3.25e-01 70.7% 92.2%