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MZ958746.1__UEM46391.1__SEA_ENCELADUS_115__00106
Bact-VirMZ958746.1__UEM46391.1__SEA_ENCELADUS_115__00106
Identity
- Accession:
- MZ958746 ↗
- Kingdom:
- phage
Quality
68.5
mean pLDDT
Taxonomy
TaxID: 2891196
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-58
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 50.0 | 4.98e-01 | 92.5% | 73.2% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 55.0 | 5.67e-01 | 98.1% | 93.9% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 48.0 | 4.26e-01 | 88.7% | 50.0% |
| 6jy5B00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.69 | 61.0 | 5.31e-01 | 100.0% | 82.9% |
| 3rioA01 | 2.30.24.10 | Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain | 0.68 | 54.0 | 5.03e-01 | 100.0% | 69.1% |
| 5l37C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.67 | 59.0 | 5.04e-01 | 100.0% | 80.2% |
| 3kbgA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.66 | 40.0 | 3.51e-01 | 73.6% | 39.5% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 59.0 | 5.42e-01 | 100.0% | 79.1% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 55.0 | 4.88e-01 | 100.0% | 82.3% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.63 | 39.0 | 4.29e-01 | 79.2% | 80.5% |
| 3deeA02 | 3.90.930.50 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.61 | 50.0 | 3.97e-01 | 94.3% | 77.2% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 52.0 | 4.17e-01 | 98.1% | 90.4% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 46.0 | 4.13e-01 | 88.7% | 59.7% |
| 3mlqH00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 41.0 | 4.39e-01 | 96.2% | 95.2% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 45.0 | 4.14e-01 | 84.9% | 63.5% |
| 3go5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 51.0 | 4.57e-01 | 100.0% | 75.9% |
| 5h4eA01 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.59 | 40.0 | 2.71e-01 | 73.6% | 33.3% |
| 2p38A01 | 3.10.450.220 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 47.0 | 4.12e-01 | 100.0% | 67.8% |
| 4f3nA00 | 3.40.50.12710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 45.0 | 2.69e-01 | 84.9% | 50.8% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 49.0 | 4.30e-01 | 100.0% | 77.8% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 42.0 | 4.03e-01 | 88.7% | 71.6% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 42.0 | 3.97e-01 | 86.8% | 72.7% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.46e-01 | 88.7% | 53.2% |
| 3buxB03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 42.0 | 3.74e-01 | 92.5% | 57.0% |
| 3oyyB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 45.0 | 4.43e-01 | 100.0% | 87.9% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 43.0 | 3.66e-01 | 100.0% | 100.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 4.00e-01 | 90.6% | 80.6% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 38.0 | 2.79e-01 | 83.0% | 71.9% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 42.0 | 3.36e-01 | 100.0% | 87.7% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 38.0 | 3.56e-01 | 83.0% | 63.6% |
| 4fxdA05 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.52 | 35.0 | 2.80e-01 | 71.7% | 53.0% |
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.51 | 32.0 | 2.64e-01 | 71.7% | 32.7% |
| 4z3xA03 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.51 | 39.0 | 2.84e-01 | 92.5% | 35.5% |
| 1vlrA01 | 3.30.200.40 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain | 0.51 | 36.0 | 3.07e-01 | 79.2% | 77.6% |
| 4dovA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.50 | 40.0 | 3.00e-01 | 96.2% | 77.7% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.50 | 37.0 | 2.78e-01 | 92.5% | 38.2% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4315771 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.75 | 57.0 | 5.37e-01 | 98.1% | 67.7% |
| 4932378 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 56.0 | 5.46e-01 | 98.1% | 73.3% |
| 4208450 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 56.0 | 5.40e-01 | 98.1% | 73.3% |
| 2642946 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.73 | 55.0 | 4.66e-01 | 98.1% | 48.4% |
| 4973274 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.73 | 51.0 | 5.12e-01 | 90.6% | 72.7% |
| 4399169 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.73 | 55.0 | 5.32e-01 | 98.1% | 73.3% |
| 4602962 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.72 | 55.0 | 3.98e-01 | 98.1% | 29.3% |
| 4598956 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 55.0 | 4.41e-01 | 98.1% | 41.9% |
| 4341478 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.72 | 54.0 | 4.67e-01 | 98.1% | 51.8% |
| 4928706 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.71 | 54.0 | 4.95e-01 | 98.1% | 62.9% |
| 4149372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 53.0 | 5.04e-01 | 98.1% | 67.7% |
| 4213134 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 54.0 | 4.04e-01 | 98.1% | 33.8% |
| 4945674 | 2.1.1.252 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2_C | 0.71 | 53.0 | 4.91e-01 | 98.1% | 62.9% |
| 4114145 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 55.0 | 4.15e-01 | 94.3% | 35.4% |
| 5054268 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.70 | 53.0 | 4.99e-01 | 98.1% | 67.7% |
| 3282644 | 2.24.1.2 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF7489 | 0.70 | 61.0 | 5.75e-01 | 100.0% | 86.2% |
| 5028066 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.70 | 53.0 | 4.97e-01 | 98.1% | 67.7% |
| 3709493 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 50.0 | 3.80e-01 | 96.2% | 32.3% |
| 4053455 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.66 | 49.0 | 4.56e-01 | 98.1% | 62.9% |
| 4183857 | 325.1.7.30 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 | 0.65 | 51.0 | 4.61e-01 | 100.0% | 62.7% |
| 5045871 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.65 | 56.0 | 5.19e-01 | 100.0% | 90.0% |
| 2502534 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.65 | 56.0 | 4.81e-01 | 100.0% | 60.9% |
| 3805340 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 56.0 | 4.20e-01 | 98.1% | 83.8% |
| 3178145 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 56.0 | 4.04e-01 | 98.1% | 66.7% |
| 3739461 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.64 | 55.0 | 3.32e-01 | 98.1% | 26.8% |
| 4039929 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 53.0 | 4.99e-01 | 100.0% | 78.5% |
| 3636460 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.63 | 56.0 | 3.33e-01 | 100.0% | 24.2% |
| 3788350 | 1.1.7.99 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1, FAD_binding_6 | 0.63 | 55.0 | 4.07e-01 | 98.1% | 72.9% |
| 3594165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 55.0 | 3.86e-01 | 98.1% | 61.8% |
| 4456732 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 52.0 | 4.56e-01 | 100.0% | 61.3% |
| 3406278 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 55.0 | 4.13e-01 | 98.1% | 74.6% |
| 1063090 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.63 | 54.0 | 4.03e-01 | 98.1% | 78.4% |
| 3254529 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.63 | 54.0 | 3.91e-01 | 98.1% | 65.2% |
| 3503415 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.63 | 48.0 | 2.93e-01 | 84.9% | 46.4% |
| 4428249 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 55.0 | 4.04e-01 | 100.0% | 72.9% |
| 4159666 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.61 | 48.0 | 3.85e-01 | 100.0% | 43.1% |
| 4068978 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.60 | 47.0 | 4.25e-01 | 100.0% | 62.7% |
| 3174363 | 3519.1.1.1 ↗ | beta complex topology › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Pex24p | 0.60 | 43.0 | 3.41e-01 | 75.5% | 55.6% |
| 3260957 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 45.0 | 3.45e-01 | 84.9% | 47.7% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.44e-01 | 84.9% | 81.0% |
| 5000121 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 40.0 | 4.49e-01 | 94.3% | 95.0% |
| 4033828 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.58 | 38.0 | 4.06e-01 | 92.5% | 80.0% |
| 5082761 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.57 | 45.0 | 3.47e-01 | 90.6% | 59.2% |
| 4948433 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.57 | 41.0 | 3.81e-01 | 88.7% | 60.3% |
| 4041343 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.56 | 39.0 | 4.02e-01 | 86.8% | 80.0% |
| 4362720 | 2.1.1.48 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C | 0.55 | 46.0 | 4.53e-01 | 100.0% | 87.9% |
| 3896688 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.55 | 42.0 | 4.11e-01 | 88.7% | 80.0% |
| 3880422 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.54 | 41.0 | 3.88e-01 | 88.7% | 70.6% |
| 5002178 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.53 | 39.0 | 4.04e-01 | 84.9% | 92.0% |
| 3519934 | 5.1.4.48 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 | 0.53 | 40.0 | 2.74e-01 | 88.7% | 87.4% |
| 5053250 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 43.0 | 4.04e-01 | 98.1% | 73.8% |
| 3675823 | 11.1.1.897 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_DEX1 | 0.52 | 37.0 | 2.71e-01 | 90.6% | 25.6% |
| 3886778 | 64.1.1.17 ↗ | beta meanders › WW domain-like › WW domain › WW domain › SRCR | 0.52 | 35.0 | 3.55e-01 | 71.7% | 72.7% |
| 3606266 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 40.0 | 2.43e-01 | 96.2% | 43.7% |
| 5023580 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 39.0 | 3.79e-01 | 88.7% | 73.8% |
| 3355345 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 41.0 | 3.87e-01 | 94.3% | 80.0% |
| 5001324 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 39.0 | 3.31e-01 | 90.6% | 44.8% |
| 3825341 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.52 | 42.0 | 3.48e-01 | 96.2% | 61.9% |
| 5026377 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.52 | 33.0 | 2.98e-01 | 88.7% | 43.8% |
| 3998038 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 41.0 | 4.13e-01 | 96.2% | 89.1% |
| 3230571 | 11.1.4.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › EMC7_beta-sandw | 0.51 | 36.0 | 2.96e-01 | 94.3% | 39.0% |
| 3960610 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 37.0 | 2.50e-01 | 81.1% | 22.3% |
| 4031151 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.50 | 40.0 | 3.60e-01 | 88.7% | 70.7% |
| 3631298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.50 | 37.0 | 3.39e-01 | 86.8% | 58.7% |
D2
medium
residues 132-193
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kvdA00 | 4.10.420.10 | Few Secondary Structures › Irregular › Smk Toxin, alpha chain › Smk Toxin, alpha chain | 0.71 | 47.0 | 4.69e-01 | 75.8% | 66.7% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 43.0 | 2.91e-01 | 83.9% | 86.3% |
| 1wivA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 35.0 | 3.37e-01 | 74.2% | 56.2% |
| 1howA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 41.0 | 2.66e-01 | 83.9% | 20.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3806216 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 37.0 | 2.44e-01 | 87.1% | 15.2% |
| 3614671 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.58 | 41.0 | 3.70e-01 | 72.6% | 56.2% |