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MZ983385.1__UAW07747.1__PVJ1_00013__00013

Bact-Vir

MZ983385.1__UAW07747.1__PVJ1_00013__00013

Identity

Accession:
MZ983385 ↗
Kingdom:
phage

Quality

88.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Psychrobacillus_phage_PVJ1

TaxID: 2876571

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-61
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19474.5 best DUF6011 42.5 5.00e-11 59.0% 73.0%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wimA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 45.0 4.00e-01 77.0% 95.7%
1z5bB03 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.56 42.0 3.17e-01 80.3% 51.7%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3554759 376.1.3.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 0.66 46.0 4.70e-01 73.8% 96.7%
5064040 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 48.0 3.37e-01 91.8% 24.9%
3623411 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.62 48.0 4.12e-01 88.5% 53.7%
3816376 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 43.0 3.90e-01 75.4% 90.6%
3880840 375.1.1.246 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rad50_zn_hook 0.57 44.0 3.70e-01 86.9% 49.0%
3668927 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.54 36.0 3.93e-01 72.1% 100.0%