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M_polyprotein

Euk-Vir

Jamestown_Canyon_virus

M_polyprotein__YP_009666885__Jamestown_Canyon_virus__35511

Identity

Accession:: YP_009666885 ↗
Protein ID:: M_polyprotein
Kingdom:: euk

Quality

75.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Jamestown_Canyon_virus

TaxID: 35511

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 547-717

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	120.9	7.90e-35	97.7%	17.9%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1tqgA00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.58	30.0	3.72e-01	86.0%	80.0%
2mmbA00	4.10.640.20	Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 ›	0.53	32.0	3.88e-01	92.4%	95.3%
2k3oA00	1.10.274.60	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain	0.51	24.0	2.77e-01	77.2%	55.8%
1y4cA03	1.20.120.660	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain	0.50	29.0	3.50e-01	84.2%	85.8%
4c0nA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.50	34.0	3.66e-01	77.8%	78.7%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2504456	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.97	95.0	8.15e-01	100.0%	69.5%
2504455	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.92	88.0	7.71e-01	100.0%	71.2%
2504457	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.88	78.0	7.08e-01	92.4%	72.4%
2504453	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.84	78.0	6.79e-01	100.0%	68.3%
3960752	5082.1.1.0 ↗	alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like	0.53	42.0	3.99e-01	83.6%	83.5%

D2 high residues 752-841

PDB

Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	58.3	6.90e-16	97.8%	9.6%

D3 high residues 843-914

PDB

Domain cluster: rep: polyprotein__YP_008709777__Murrumbidgee_virus__1406134__D787-850

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	64.8	7.50e-18	100.0%	8.2%

D4 medium residues 113-174

PDB

Domain cluster: rep: polyprotein__YP_009667022__Witwatersrand_virus__1678231__D115-177

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	86.0	3.70e-24	100.0%	22.1%

D5 medium residues 347-459

PDB

Domain cluster: rep: polyprotein__YP_009666942__Enseada_virus__1821545__D351-432_453-478

D6 medium residues 987-1022_1105-1147_1228-1255

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009362035__Kibale_virus__1406344__D349-405_490-561_609-646

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	42.3	4.60e-11	45.8%	5.2%
PF03557.22	Bunya_G1	30.8	1.40e-07	36.4%	4.3%

D7 medium residues 1256-1373

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009664619__Gouleako_virus__603003__D815-896

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	138.4	4.20e-40	100.0%	13.6%

D8 medium residues 1374-1444

PDB