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M_protein
Euk-VirMount_Mabu_Lophuromys_virus_2
M_protein__YP_009666851__Mount_Mabu_Lophuromys_virus_2__2116560
Identity
- Accession:
- YP_009666851 ↗
- Protein ID:
- M_protein
- Kingdom:
- euk
Quality
84.2
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Jeilongvirus›
Mount_Mabu_Lophuromys_virus_2
TaxID: 2116560
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-16_173-331
Domain cluster:
rep: M__YP_009508513__Antarctic_penguin_virus_B__2006073__D6-17_185-340
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23765.2 best | Matrix_Paramyxo_C | 214.3 | 1.10e-63 | 92.9% | 97.5% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g1gA02 | 2.70.20.60 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, C-terminal domain | 0.89 | 80.0 | 8.00e-01 | 92.3% | 92.9% |
| 5d1pA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 23.0 | 3.47e-01 | 78.0% | 88.1% |
| 2r0cA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.56 | 32.0 | 3.57e-01 | 83.9% | 68.8% |
| 4g1lA01 | 2.70.20.50 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain | 0.55 | 44.0 | 4.49e-01 | 99.4% | 87.7% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.52 | 28.0 | 3.64e-01 | 80.4% | 100.0% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.52 | 26.0 | 3.59e-01 | 79.2% | 100.0% |
| 1egjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 27.0 | 3.36e-01 | 100.0% | 84.2% |
| 4ncdA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 32.0 | 3.74e-01 | 100.0% | 89.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2887044 | 54.1.1.6 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C | 0.94 | 72.0 | 7.48e-01 | 94.6% | 82.9% |
| 2321027 | 54.1.1.6 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C | 0.94 | 78.0 | 7.82e-01 | 94.6% | 84.5% |
| 1155590 | 54.1.1.6 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C | 0.89 | 81.0 | 7.58e-01 | 94.6% | 81.3% |
| 2887049 | 54.1.1.1 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix | 0.58 | 37.0 | 4.43e-01 | 86.9% | 96.4% |
| 863407 | 54.1.1.1 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix | 0.57 | 43.0 | 4.51e-01 | 94.0% | 85.6% |
| 3212628 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 33.0 | 3.73e-01 | 100.0% | 82.4% |
| 3501494 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 33.0 | 3.72e-01 | 100.0% | 82.4% |
D2
high
residues 34-169
Domain cluster:
rep: matrix_protein__YP_009094039__Pneumovirus_dog_Bari_100-12_ITA_2012__2482952__D2-120
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00661.29 best | Matrix_Paramyxo_N | 180.5 | 2.80e-53 | 100.0% | 80.8% |