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M_protein
Euk-VirZambian_malbrouck_virus_1
M_protein__YP_009824955__Zambian_malbrouck_virus_1__2682610
Identity
- Accession:
- YP_009824955 ↗
- Protein ID:
- M_protein
- Kingdom:
- euk
Quality
69.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Arteriviridae›
Epsilonarterivirus›
Zambian_malbrouck_virus_1
TaxID: 2682610
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-87
Domain cluster:
rep: ORF8_protein__YP_009505579__Simian_hemorrhagic_encephalitis_virus__1965068__D9-87
D2
high
residues 98-142
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00951.24 best | Arteri_Gl | 25.1 | 2.00e-05 | 100.0% | 22.9% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5kckA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.68 | 46.0 | 2.65e-01 | 71.1% | 79.1% |
| 7asgA02 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.57 | 44.0 | 3.22e-01 | 82.2% | 67.2% |
| 2pmlX01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 37.0 | 2.81e-01 | 75.6% | 82.3% |
| 2x5jQ01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 40.0 | 2.72e-01 | 86.7% | 90.1% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.50 | 35.0 | 3.36e-01 | 75.6% | 69.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4887360 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.68 | 47.0 | 4.35e-01 | 73.3% | 71.7% |
| 3894433 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 43.0 | 2.55e-01 | 71.1% | 86.6% |
| 3696115 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.61 | 52.0 | 3.34e-01 | 97.8% | 30.6% |
| 4146515 | 304.148.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Rv1825/MT1873 › Uncharacterized protein Rv1825/MT1873 › DUF881 | 0.57 | 45.0 | 3.33e-01 | 100.0% | 31.1% |
| 4016013 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.55 | 43.0 | 3.16e-01 | 86.7% | 65.3% |
| 4951112 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.55 | 42.0 | 3.07e-01 | 86.7% | 66.4% |
| 3877994 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.54 | 42.0 | 3.08e-01 | 86.7% | 67.7% |
| 4945074 | 2003.1.1.377 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_C | 0.53 | 38.0 | 2.64e-01 | 80.0% | 87.1% |
| 4643222 | 2003.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_N | 0.52 | 38.0 | 2.60e-01 | 84.4% | 89.1% |