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Morn_repeat_protein

Euk-Vir

Pandoravirus_inopinatum

Morn_repeat_protein__YP_009119116__Pandoravirus_inopinatum__1605721

Identity

Accession:: YP_009119116 ↗
Protein ID:: Morn_repeat_protein
Kingdom:: euk

Quality

78.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-118

PDB

Domain cluster: rep: F-box_domain_containing_protein__YP_009483259__Pandoravirus_quercus__2107709__D363-500

CATH (16)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4dm5A00	3.30.1450.10	Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 ›	0.60	33.0	3.60e-01	90.6%	63.2%
2g2sA00	3.30.1300.40	Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 ›	0.57	29.0	3.57e-01	85.8%	79.7%
5fgoA00	3.10.450.700	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.57	32.0	3.98e-01	91.5%	93.5%
2e5aA02	3.30.390.50	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain	0.55	39.0	4.13e-01	90.6%	83.9%
5vogA00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.54	39.0	3.31e-01	97.2%	45.5%
2hjmA01	1.20.120.460	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like	0.54	34.0	3.74e-01	97.2%	79.1%
4l3rA00	2.40.128.270	Mainly Beta › Beta Barrel › Lipocalin ›	0.53	38.0	3.48e-01	88.7%	55.2%
2k3iA01	3.30.70.860	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.53	34.0	3.74e-01	97.2%	82.4%
2d4rA00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.52	43.0	3.88e-01	89.6%	79.5%
1lf7A00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.52	41.0	3.58e-01	100.0%	54.9%
2jqjA01	2.60.200.20	Mainly Beta › Sandwich › Tumour Suppressor Smad4 ›	0.52	39.0	3.65e-01	94.3%	63.8%
1pv1A00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.51	42.0	3.16e-01	91.5%	61.4%
3tfzB00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.51	41.0	3.65e-01	89.6%	77.6%
7oufB01	3.30.420.10	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H	0.51	36.0	3.26e-01	91.5%	52.3%
4c89C00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.51	45.0	3.20e-01	100.0%	59.6%
2ra6C00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.50	39.0	3.58e-01	100.0%	62.9%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3297981	252.1.1.1 ↗	a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD	0.61	31.0	4.05e-01	81.1%	92.7%
3906040	9.1.1.1 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin	0.57	45.0	3.94e-01	100.0%	54.1%
4680442	9.1.1.1 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin	0.57	45.0	3.92e-01	100.0%	55.2%
5053551	3241.1.1.1 ↗	alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › GPP34	0.56	40.0	3.16e-01	73.6%	85.2%
3589823	295.1.1.0 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain	0.55	32.0	3.96e-01	91.5%	95.4%
3290058	101.1.2.26 ↗	alpha arrays › HTH › HTH › winged helix domain › HxlR	0.54	30.0	2.74e-01	72.6%	39.3%
3854952	9.1.1.1 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin	0.53	46.0	4.18e-01	100.0%	82.7%
3763936	9.1.1.1 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin	0.52	45.0	4.01e-01	98.1%	80.0%
3941378	391.1.1.0 ↗	few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module	0.51	36.0	3.81e-01	81.1%	81.1%
4875038	9.1.1.11 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2	0.51	43.0	3.88e-01	100.0%	66.0%
3777334	9.1.1.1 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin	0.51	44.0	3.94e-01	100.0%	81.1%
4880620	247.1.1.1 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B	0.50	43.0	3.37e-01	95.3%	93.1%