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MutS7

Euk-Vir

Chrysochromulina_ericina_virus

MutS7__YP_009173536__Chrysochromulina_ericina_virus__455364

Identity

Accession:
YP_009173536 ↗
Protein ID:
MutS7
Kingdom:
euk

Quality

69.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-116
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01624.26 best MutS_I 30.7 4.30e-07 99.1% 76.1%
D2 high residues 132-297
PDB
D3 medium residues 326-495_632-672
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05192.24 best MutS_III 57.3 3.90e-15 93.4% 88.7%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5yk4A03 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.92 55.0 6.63e-01 97.2% 85.7%
1e3mB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.84 59.0 7.00e-01 83.4% 100.0%
3thxB03 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.83 62.0 6.68e-01 97.6% 87.5%
3thxA03 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.77 73.0 7.08e-01 98.1% 94.3%
2o8bB03 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.74 58.0 6.14e-01 97.6% 88.8%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 24.0 3.29e-01 72.5% 67.0%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.59 34.0 4.18e-01 70.6% 87.0%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.58 35.0 4.27e-01 73.9% 90.5%
2yevA03 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.54 40.0 4.22e-01 86.3% 86.4%
4oo2A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 34.0 3.47e-01 73.5% 62.6%
3jrtA00 1.20.120.1060 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 38.0 4.24e-01 73.5% 97.0%
1wolA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.53 31.0 3.92e-01 70.1% 98.4%
4xaiB02 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.53 38.0 3.93e-01 73.0% 93.9%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.52 33.0 3.96e-01 90.0% 98.5%
4cbeA00 1.20.120.1640 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.50 39.0 3.95e-01 81.0% 90.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.50 30.0 3.81e-01 79.1% 98.4%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3743247 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.85 80.0 6.60e-01 97.2% 95.9%
3178507 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.84 79.0 6.68e-01 98.1% 94.2%
2813445 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.84 58.0 6.42e-01 80.6% 85.1%
3472013 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.83 79.0 6.60e-01 97.6% 90.8%
4636696 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.82 79.0 6.75e-01 98.1% 93.1%
None 0.82 80.0 5.28e-01 100.0% 40.8%
3381691 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.82 78.0 6.57e-01 97.6% 94.1%
4943696 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.82 78.0 6.70e-01 97.6% 92.8%
4088876 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 79.0 5.21e-01 100.0% 39.1%
None 0.82 79.0 5.27e-01 100.0% 41.1%
4062698 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 79.0 5.23e-01 100.0% 40.0%
4003318 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.82 77.0 6.50e-01 97.2% 92.2%
4297289 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.82 77.0 6.69e-01 97.6% 94.3%
3174832 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 79.0 5.22e-01 100.0% 43.6%
4597437 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.82 77.0 6.51e-01 97.6% 93.8%
3600702 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.82 76.0 6.55e-01 96.2% 94.8%
4962753 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.81 77.0 6.67e-01 97.6% 95.7%
3709669 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 77.0 6.59e-01 97.6% 94.5%
4421536 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 77.0 6.61e-01 98.1% 94.5%
4405736 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 77.0 6.63e-01 97.6% 92.5%
3264636 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.40e-01 97.2% 89.4%
4285351 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.44e-01 96.2% 89.8%
4020541 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.81 76.0 6.44e-01 96.7% 95.0%
3555106 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.47e-01 96.7% 93.7%
5060078 2484.1.1.291 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_V 0.81 78.0 5.25e-01 100.0% 41.6%
4160947 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.58e-01 97.2% 92.5%
4624584 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 77.0 6.60e-01 98.1% 92.3%
4076057 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 77.0 6.56e-01 97.6% 92.6%
4282238 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 78.0 5.13e-01 100.0% 40.4%
4569662 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 77.0 6.59e-01 98.1% 91.6%
4095689 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 75.0 6.47e-01 95.7% 93.4%
4378342 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.81 76.0 5.66e-01 96.7% 61.1%
4190224 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.81 75.0 5.65e-01 95.7% 62.2%
4416596 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.53e-01 96.7% 91.5%
4680501 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 77.0 6.61e-01 98.1% 93.4%
4252702 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.57e-01 97.6% 94.4%
4115309 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.67e-01 97.6% 94.6%
4515483 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 76.0 6.52e-01 97.6% 92.9%
3178263 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 75.0 6.37e-01 96.7% 95.0%
4181298 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.81 75.0 5.66e-01 95.7% 63.6%
3443644 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 78.0 6.50e-01 100.0% 92.1%
3270591 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.81 75.0 6.44e-01 96.7% 94.2%
3936533 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 74.0 6.32e-01 96.2% 89.1%
None 0.80 77.0 5.20e-01 100.0% 41.9%
4155387 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 75.0 6.39e-01 97.6% 93.8%
4627664 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.80 77.0 6.51e-01 100.0% 92.0%
3622749 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 74.0 6.34e-01 95.7% 91.9%
4159140 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.80 74.0 5.51e-01 96.2% 58.9%
3859690 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 74.0 6.29e-01 96.2% 91.3%
4109850 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 75.0 6.54e-01 97.6% 93.3%
3170634 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.80 73.0 6.18e-01 95.7% 97.3%
4084820 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 74.0 6.50e-01 95.7% 95.2%
3536880 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 75.0 6.33e-01 97.6% 93.8%
4182431 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.80 74.0 6.33e-01 97.2% 94.7%
4647466 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.80 75.0 6.39e-01 97.6% 94.6%
54696 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.80 75.0 6.50e-01 97.2% 93.9%
None 0.80 76.0 5.09e-01 100.0% 41.7%
3719793 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.79 74.0 5.98e-01 96.7% 81.1%
3798502 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.79 75.0 6.35e-01 98.1% 90.3%
3617695 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 74.0 6.15e-01 97.6% 92.2%
4121534 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 73.0 6.16e-01 96.2% 93.3%
3927382 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 74.0 6.33e-01 98.1% 93.4%
3234505 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 74.0 6.33e-01 97.2% 92.6%
3476713 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 76.0 6.33e-01 100.0% 93.1%
4969654 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.79 75.0 6.62e-01 98.1% 94.4%
4140305 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 73.0 6.32e-01 97.2% 97.4%
4308520 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 73.0 6.33e-01 96.2% 93.1%
3177683 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 74.0 6.39e-01 97.6% 93.8%
3780716 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.79 74.0 6.39e-01 98.6% 93.9%
3238018 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.78 72.0 6.14e-01 95.7% 92.7%
3789678 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.78 73.0 6.07e-01 96.7% 94.3%
996352 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.78 73.0 6.31e-01 97.6% 93.8%
4135238 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.77 72.0 6.37e-01 96.7% 93.8%
54690 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.77 73.0 6.53e-01 97.2% 99.3%
4124135 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.77 72.0 6.28e-01 97.2% 94.7%
3261682 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.77 69.0 5.94e-01 93.4% 95.9%
4989009 2484.1.1.331 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_III 0.77 64.0 4.91e-01 85.3% 58.1%
3914216 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.76 69.0 5.92e-01 95.3% 96.6%
3599467 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.76 72.0 6.06e-01 98.1% 91.4%
3699195 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.75 69.0 6.00e-01 96.7% 94.5%
3990348 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.68 63.0 5.80e-01 97.2% 100.0%
4205503 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.58 44.0 4.63e-01 78.7% 96.8%
3955485 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.57 43.0 3.90e-01 79.1% 64.5%
3633897 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.52 35.0 3.75e-01 80.6% 79.8%
5059414 5069.1.1.56 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › PF27518 0.51 37.0 3.92e-01 77.7% 83.2%
D4 medium residues 496-523_566-631
PDB
D5 medium residues 705-885
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00488.28 best MutS_V 134.6 5.80e-39 95.6% 88.8%
D6 medium residues 917-997
PDB