Back to structures

MutT_motif

Euk-Vir

Deerpox_virus_W-848-83

MutT_motif__YP_227471__Deerpox_virus_W-848-83__305674

Identity

Accession:
YP_227471 ↗
Protein ID:
MutT_motif
Kingdom:
euk

Quality

91.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-29_156-172_213-239
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08476.16 best VD10_N 52.2 5.40e-14 41.1% 65.1%
D2 medium residues 30-66_122-155_173-212
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00293.35 best NUDIX 37.0 4.40e-09 88.3% 38.8%
D3 medium residues 67-121
PDB
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sqmA04 1.25.40.320 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain 0.72 52.0 3.80e-01 78.2% 35.6%
1sxjB03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.70 50.0 4.17e-01 74.5% 90.2%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 47.0 4.35e-01 78.2% 57.7%
3mkqB00 1.25.40.470 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 51.0 3.63e-01 85.5% 31.1%
2mbgA01 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.63 48.0 3.38e-01 89.1% 72.4%
3o6xA02 1.20.120.1560 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.63 39.0 2.90e-01 92.7% 23.6%
2llwA00 1.10.260.100 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.62 44.0 4.10e-01 76.4% 69.0%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.59 44.0 3.29e-01 83.6% 88.0%
3vurA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 43.0 3.67e-01 89.1% 87.6%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 44.0 3.15e-01 87.3% 77.4%
2jqtA00 1.20.1280.40 Mainly Alpha › Up-down Bundle › Monooxygenase › HHA 0.58 40.0 4.04e-01 76.4% 73.7%
1sy7A02 1.20.1370.20 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain 0.56 47.0 4.54e-01 100.0% 95.3%
1i17A00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.56 34.0 2.72e-01 83.6% 30.8%
7vw6B01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.55 44.0 4.17e-01 90.9% 97.0%
7t2rC01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.55 39.0 3.97e-01 83.6% 98.2%
5k9xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 39.0 2.63e-01 85.5% 22.6%
2jaeA03 1.20.1440.240 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.51 42.0 3.53e-01 96.4% 74.3%
1vw4L01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.51 44.0 3.29e-01 96.4% 41.5%
2h0aA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 31.0 2.64e-01 89.1% 30.4%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3837456 109.4.1.12 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin 0.72 56.0 3.79e-01 87.3% 27.9%
3460319 109.59.1.0 alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain 0.71 55.0 4.97e-01 87.3% 75.0%
3645671 109.59.1.12 alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Clathrin 0.71 56.0 3.90e-01 87.3% 32.4%
3821758 109.59.1.0 alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain 0.69 55.0 4.41e-01 90.9% 52.2%
2897635 3317.3.1.0 alpha arrays › KorB C-terminal domain-like › Helical domain of Rubisco accumulation factor 1 › Helical domain of Rubisco accumulation factor 1 0.66 46.0 3.67e-01 74.5% 46.1%
3433621 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.64 42.0 4.46e-01 74.5% 82.2%
3554027 109.4.1.2 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.63 48.0 3.44e-01 89.1% 38.9%
4281897 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.62 43.0 3.54e-01 72.7% 44.0%
4856249 151.1.1.1 alpha bundles › Hemocyanin-N › Hemocyanin-N › Hemocyanin-N › Hemocyanin_N 0.61 45.0 4.20e-01 80.0% 78.6%
4332288 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.59 40.0 3.34e-01 72.7% 41.8%
3902188 185.1.3.1 alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › GDNF receptor › GDNF 0.59 42.0 3.80e-01 76.4% 81.2%
57622 4079.1.1.0 alpha bundles › PA2201 C-terminal domain-like › PA2201 C-terminal domain-like › PA2201 C-terminal domain-like 0.58 47.0 3.55e-01 98.2% 65.4%
5049375 182.1.2.1 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › Fe-S cluster domain of DNA primase › DNA_primase_lrg 0.57 46.0 3.66e-01 100.0% 83.7%
4596898 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.57 42.0 3.82e-01 83.6% 65.0%
2142412 4048.1.1.1 alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel 0.56 47.0 4.02e-01 100.0% 72.9%
3267703 4048.1.1.1 alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel 0.56 48.0 4.07e-01 100.0% 70.5%
3783806 592.1.1.2 alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI 0.55 38.0 3.17e-01 76.4% 39.0%
3631439 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.54 36.0 3.07e-01 74.5% 40.0%
3173335 1091.1.1.1 alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › Ribosomal_60s 0.54 38.0 3.75e-01 94.5% 70.0%
5071555 131.1.1.14 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Cas3_HD 0.54 48.0 3.13e-01 100.0% 43.3%
3342850 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.53 35.0 3.23e-01 76.4% 49.3%
4018686 2007.1.1.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI 0.52 42.0 2.94e-01 100.0% 88.0%
3844496 592.1.1.12 alpha arrays › PWI domain-like › PWI domain › PWI domain › PP1_inhibitor 0.51 36.0 3.23e-01 76.4% 86.3%
3589942 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.51 41.0 2.83e-01 98.2% 26.7%
3258522 601.48.1.0 alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain 0.50 38.0 3.66e-01 87.3% 83.1%