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N1R_p28-like_protein
Euk-VirMythimna_separata_entomopoxvirus_L
N1R_p28-like_protein__YP_008003564__Mythimna_separata_entomopoxvirus_L__1293572
Identity
- Accession:
- YP_008003564 ↗
- Protein ID:
- N1R_p28-like_protein
- Kingdom:
- euk
Quality
80.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Betaentomopoxvirus›
Mythimna_separata_entomopoxvirus_'L'
TaxID: 1293572
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-95
Domain cluster:
rep: Kila-N_RING_finger_protein__YP_009408558__NY_014_poxvirus__2025360__D5-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04383.20 best | KilA-N | 54.1 | 1.80e-14 | 90.4% | 80.4% |
D2
high
residues 106-197
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.65 | 48.0 | 4.83e-01 | 78.3% | 97.8% |
| 6w72A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 47.0 | 4.25e-01 | 92.4% | 97.7% |
| 2qyuA03 | 3.40.1850.10 | Alpha Beta › 3-Layer(aba) Sandwich › HECT-like ubiquitin ligase fold › HECT-like ubiquitin ligase | 0.53 | 26.0 | 2.92e-01 | 81.5% | 57.3% |
| 6w6vE01 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.52 | 41.0 | 3.55e-01 | 88.0% | 100.0% |
| 4zpxA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 39.0 | 3.91e-01 | 88.0% | 80.4% |
| 2h21A02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.52 | 33.0 | 2.79e-01 | 91.3% | 36.4% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.50 | 38.0 | 3.93e-01 | 80.4% | 97.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3613416 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.79 | 71.0 | 6.49e-01 | 98.9% | 81.7% |
| 3597677 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.78 | 71.0 | 6.82e-01 | 100.0% | 93.3% |
| 3689357 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.78 | 72.0 | 5.84e-01 | 100.0% | 64.8% |
| 3226092 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.59 | 54.0 | 3.66e-01 | 100.0% | 79.1% |