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N1R_p28-like_protein

Euk-Vir

Mythimna_separata_entomopoxvirus_L

N1R_p28-like_protein__YP_008003604__Mythimna_separata_entomopoxvirus_L__1293572

Identity

Accession:: YP_008003604 ↗
Protein ID:: N1R_p28-like_protein
Kingdom:: euk

Quality

78.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Betaentomopoxvirus› Mythimna_separata_entomopoxvirus_'L'

TaxID: 1293572

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-141

PDB

Domain cluster: rep: IMGVR_UViG_3300000568_000096-3300000568-Draft_1006303631__D8-117

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02498.23 best	Bro-N	55.8	8.30e-15	83.6%	99.0%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3buxB02	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.61	34.0	3.88e-01	81.1%	73.0%
3ipjA01	3.30.1360.60	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB	0.56	24.0	2.99e-01	98.4%	61.3%
3hunA01	3.40.710.10	Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily	0.54	40.0	3.07e-01	78.7%	91.4%
2zyzB01	3.40.1170.20	Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain	0.51	35.0	3.98e-01	84.4%	95.5%
2wb6A00	3.90.1150.90	Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 ›	0.51	34.0	3.49e-01	91.8%	71.9%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3968916	101.1.9.63 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N	0.75	56.0	6.03e-01	98.4%	89.5%
4033119	101.1.9.63 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N	0.74	56.0	6.15e-01	90.2%	95.0%
3163642	101.1.9.63 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N	0.74	60.0	6.35e-01	100.0%	94.5%
4954530	101.1.9.143 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM	0.70	57.0	5.90e-01	87.7%	100.0%
3944712	101.1.9.40 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N	0.70	55.0	5.94e-01	88.5%	97.1%
3978692	101.1.9.143 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM	0.65	56.0	5.23e-01	96.7%	76.0%
4027682	108.1.1.27 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6	0.63	34.0	4.19e-01	74.6%	85.3%
3861402	148.1.1.86 ↗	alpha arrays › Histone-like › Histone-related › Histone › DUF5525	0.58	43.0	3.89e-01	77.9%	94.5%
3624148	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.56	41.0	4.34e-01	78.7%	85.5%
4991404	101.1.2.895 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF2250	0.54	35.0	4.15e-01	83.6%	100.0%
3831826	101.1.2.28 ↗	alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B	0.52	32.0	3.74e-01	73.0%	92.5%
4993189	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.52	26.0	3.64e-01	99.2%	100.0%
4995344	101.1.2.28 ↗	alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B	0.51	32.0	3.48e-01	73.0%	76.8%
4932760	101.1.2.28 ↗	alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B	0.51	32.0	3.73e-01	73.0%	98.7%
4929638	101.1.2.28 ↗	alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B	0.51	29.0	3.56e-01	73.8%	95.7%
5028744	101.1.2.28 ↗	alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B	0.50	30.0	3.40e-01	76.2%	78.9%

D2 high residues 150-229

PDB

Domain cluster: rep: N1R_p28-like_protein__YP_008004170__Choristoneura_biennis_entomopoxvirus__10288__D139-212

D3 high residues 239-360

PDB

Domain cluster: rep: N1R_p28-like_protein__YP_008003824__Adoxophyes_honmai_entomopoxvirus_L__1293540__D227-353

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12299.14 best	DUF3627	61.9	6.90e-17	59.8%	76.3%