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N1R_p28-like_protein
Euk-VirMythimna_separata_entomopoxvirus_L
N1R_p28-like_protein__YP_008003664__Mythimna_separata_entomopoxvirus_L__1293572
Identity
- Accession:
- YP_008003664 ↗
- Protein ID:
- N1R_p28-like_protein
- Kingdom:
- euk
Quality
78.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Betaentomopoxvirus›
Mythimna_separata_entomopoxvirus_'L'
TaxID: 1293572
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-69
D2
high
residues 101-157
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10553.15 best | MSV199 | 27.4 | 5.00e-06 | 100.0% | 33.3% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.71 | 49.0 | 4.29e-01 | 71.9% | 97.6% |
| 5y27A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.67 | 46.0 | 3.87e-01 | 73.7% | 41.8% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.63 | 46.0 | 4.05e-01 | 78.9% | 75.9% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.62 | 54.0 | 4.35e-01 | 100.0% | 76.5% |
| 3fkeA01 | 1.10.8.950 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain | 0.55 | 37.0 | 3.54e-01 | 71.9% | 71.8% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 38.0 | 3.74e-01 | 73.7% | 86.7% |