N1R_p28-like_protein

Euk-Vir

Choristoneura_biennis_entomopoxvirus

N1R_p28-like_protein__YP_008004081__Choristoneura_biennis_entomopoxvirus__10288

Identity

79.4 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Betaentomopoxvirus› Choristoneura_biennis_entomopoxvirus

TaxID: 10288

View cluster (2 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-75_113-136

PDB

Domain cluster: rep: N1R_p28-like_protein__YP_008004623__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D80-201

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10553.15 best	MSV199	39.1	1.20e-09	99.0%	47.7%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6cy5A01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.56	41.0	4.26e-01	79.4%	84.3%
2odaA00	3.40.50.1000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like	0.55	38.0	3.06e-01	71.1%	76.0%
2ggzA00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.53	46.0	3.99e-01	100.0%	87.3%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4355353	3948.1.1.3 ↗	alpha bundles › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › PF26104	0.70	49.0	4.08e-01	73.2%	73.5%
5020381	2005.1.1.4 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase	0.59	45.0	3.07e-01	80.4%	42.1%
3602300	2005.1.1.4 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase	0.57	41.0	3.08e-01	89.7%	28.6%
3508584	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.53	45.0	3.32e-01	100.0%	79.9%

D2 medium residues 176-249

PDB