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N1R_p28-like_protein
Euk-VirChoristoneura_biennis_entomopoxvirus
N1R_p28-like_protein__YP_008004126__Choristoneura_biennis_entomopoxvirus__10288
Identity
- Accession:
- YP_008004126 ↗
- Protein ID:
- N1R_p28-like_protein
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Betaentomopoxvirus›
Choristoneura_biennis_entomopoxvirus
TaxID: 10288
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-114
Domain cluster:
rep: ubiquitin_ligase__YP_005296343__Cotia_virus_SPAn232__930275__D17-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04383.20 best | KilA-N | 48.8 | 7.90e-13 | 88.4% | 78.5% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.76 | 64.0 | 6.75e-01 | 99.1% | 100.0% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.58 | 36.0 | 4.23e-01 | 75.9% | 92.1% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.57 | 39.0 | 3.73e-01 | 75.9% | 58.6% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 38.0 | 4.24e-01 | 70.5% | 91.7% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.56 | 34.0 | 4.00e-01 | 77.7% | 93.2% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.55 | 30.0 | 3.89e-01 | 75.9% | 100.0% |
| 7agpA01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.54 | 30.0 | 3.79e-01 | 73.2% | 98.4% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.53 | 41.0 | 3.91e-01 | 100.0% | 68.7% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 41.0 | 3.93e-01 | 87.5% | 70.9% |
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.52 | 32.0 | 3.52e-01 | 79.5% | 74.7% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.52 | 44.0 | 4.17e-01 | 94.6% | 82.6% |
| 2h1yA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 31.0 | 3.66e-01 | 77.7% | 91.4% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.42e-01 | 83.9% | 59.7% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 28.0 | 3.17e-01 | 100.0% | 67.1% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 40.0 | 3.58e-01 | 83.0% | 100.0% |
| 1ydlA00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.51 | 26.0 | 3.13e-01 | 71.4% | 74.6% |
| 1vi7A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 30.0 | 3.54e-01 | 75.0% | 90.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3197602 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.76 | 64.0 | 6.05e-01 | 100.0% | 76.9% |
| 3171223 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.74 | 61.0 | 6.31e-01 | 100.0% | 94.2% |
| 4572703 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.74 | 61.0 | 5.74e-01 | 100.0% | 73.3% |
| 3785460 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.68 | 62.0 | 5.74e-01 | 99.1% | 89.2% |
| 3993298 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.63 | 32.0 | 3.67e-01 | 79.5% | 66.3% |
| 3597641 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.60 | 31.0 | 3.60e-01 | 79.5% | 70.7% |
| 3286891 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.58 | 31.0 | 4.15e-01 | 77.7% | 100.0% |
| 3608339 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.56 | 43.0 | 4.03e-01 | 80.4% | 95.6% |
| 4140109 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.56 | 36.0 | 4.27e-01 | 78.6% | 97.3% |
| 3927512 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.56 | 44.0 | 4.03e-01 | 85.7% | 95.3% |
| 4034422 | 3425.2.1.3 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › PF29809 | 0.55 | 39.0 | 3.02e-01 | 73.2% | 46.5% |
| 4929096 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.55 | 28.0 | 3.07e-01 | 100.0% | 56.8% |
| 3591785 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.54 | 40.0 | 3.70e-01 | 79.5% | 84.0% |
| 5035705 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.53 | 34.0 | 3.82e-01 | 78.6% | 84.7% |
| 4567408 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.52 | 30.0 | 3.65e-01 | 74.1% | 90.0% |
| 3386797 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.52 | 39.0 | 3.14e-01 | 79.5% | 95.1% |
| 4202472 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.52 | 30.0 | 3.67e-01 | 75.0% | 91.4% |
| 5023957 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.52 | 27.0 | 3.13e-01 | 87.5% | 68.8% |
| 4940345 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.51 | 39.0 | 3.72e-01 | 81.2% | 72.6% |
| 3501936 | 5104.1.1.2 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 | 0.51 | 40.0 | 4.25e-01 | 83.0% | 100.0% |
| 3718665 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 31.0 | 3.49e-01 | 82.1% | 81.2% |
| 3706910 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.50 | 42.0 | 3.55e-01 | 93.8% | 98.0% |